| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5165 |
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| Symbol | |
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| ID | 6246658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2280933 |
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| End bp | 2281649 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642596894 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001861297 |
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| Protein GI | 186473955 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.283409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC GTACTTTTCT GATAACGGGC GCCACCAAAG GCATCGGTCT CGCGCTCAGC
GAGCGGCTCG TAGCGGCAGG GCATCAGGTC ATCGGCATCG CGCGTTCGCA CGCGCCGTTT
CCTGGCGAAC TCGTCCCGCT GGACCTCGGT GATCGCGCCG CGACCGGCGC AGCACTACGC
GAGTTGGCGC GACGCCATTG GGTCGACGGC ATCATCAACA ATGTCGGCCT GGTCCGGCCG
CAACGCGTCG AAGCAGTCGA TCTCGATACG CTTGACGAAG TCTTTTCCGT GAATCTTCAT
CCAGCCGTCC AGACGGTGCA GGCATTTTTG CCCGGCATGC GTGAGCGCGG TTGGGGGCGC
ATCGTCAATA TTTCCAGCCT CACCATTCTG GGCATCACGC AACGCACAGC CTACGCTGCT
GCAAAGGCGG CGCTCGTGAG CTTTGCCCGT ACGTGGGCGC TGGAACTCGC GACGACAGGC
GTCACGGTCA ATTCGGTCGC ACCCGGTCCC ACTGAAACGG AGCTGTTCCG CGCCAACAAT
CCGCCGGGCA GCCAGGGCGA GCAGCGCTAT CTGTCTGGGG TGCCAATGGG GCGCTTCGGC
AAGCCAGAAG AAATAGCCGC GGCGATCGCC TTCCTGCTTT CGGATGAAGC GGGCTTCATC
ACCGGACAGA CACTCTTTGT CGACGGCGGG GCGTCAATCG GGAAGGCCGG AATCTGA
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| Protein sequence | MTKRTFLITG ATKGIGLALS ERLVAAGHQV IGIARSHAPF PGELVPLDLG DRAATGAALR
ELARRHWVDG IINNVGLVRP QRVEAVDLDT LDEVFSVNLH PAVQTVQAFL PGMRERGWGR
IVNISSLTIL GITQRTAYAA AKAALVSFAR TWALELATTG VTVNSVAPGP TETELFRANN
PPGSQGEQRY LSGVPMGRFG KPEEIAAAIA FLLSDEAGFI TGQTLFVDGG ASIGKAGI
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