Gene Bphy_5163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5163 
Symbol 
ID6246656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2279575 
End bp2280150 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content59% 
IMG OID642596892 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001861295 
Protein GI186473953 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.218763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.975035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT TCAACGCCTA CACCATCGAT ACCGCACCGG CAAACTCGAA GCCCCTGCTC 
GAAGGCACGA AAGCCGCCTT CGGCTTCGTG CCCAATCTCC AGTCCTTCAT GGCGGAATCG
CCTGAACTGC TGGCCGGCTA CTCGGCGCTC TGGGATCTGT TTTCCAAAAG CACACTGACG
CCGCACGAAC AGCAGGTCGT CTATCTGACC TCGAACTTCG AGAACGACTG CCACTACTGC
ATGGCTGGCC ACAGCACGCT TGCGAAAATG ATCAAGATGG ATCCCGCCGT TATCGATGCG
CTGCGCGCCG GCACTGAGCT TCCCGACGCG AAGCTCGAAG CCCTGCATCG CTTTGCGACC
ATCGTGGTGC GTGAACGCGG CTTCGCGTGC GATGCGGATG TCGATGCATT CCTCGCCGCC
GGCTACACGC GTCGCAATGT GCTCGAAGTG ATTCTCGGCG TCGCGACGAA GGTGATGAGC
AACTATACGA ATCACGTCGT GCATACGCCT TACGATGCCT TCATGAAGGG CAATGCGTGG
ACCAAGCCGC AGACGGCAGT TGCGGCAGGC TTCTGA
 
Protein sequence
MNTFNAYTID TAPANSKPLL EGTKAAFGFV PNLQSFMAES PELLAGYSAL WDLFSKSTLT 
PHEQQVVYLT SNFENDCHYC MAGHSTLAKM IKMDPAVIDA LRAGTELPDA KLEALHRFAT
IVVRERGFAC DADVDAFLAA GYTRRNVLEV ILGVATKVMS NYTNHVVHTP YDAFMKGNAW
TKPQTAVAAG F