| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5162 |
|---|
| Symbol | |
|---|
| ID | 6246655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2278174 |
|---|
| End bp | 2279193 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642596891 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_001861294 |
|---|
| Protein GI | 186473952 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.504378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.824643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGG CAGCAATCGC GGTGGCGCTG TGTCTGGCTG CAGCATCGGT GGGCGCATCG
GCGCAGGTCG CAACCGGCGA TACGTCGTCG ATGAAGATCG CGCTGTCGAA CAACTATGCA
GGCAACAGTT GGCGCCAGCA GATGCTCAAG AGCTGGTCGA GCGTGGCGGA TCCCGCGGTG
AAGCAGAAGA TCGTCGCTGC CGCGCCCAGC TTCACGACGG CCGAGAGCCA GGCGACCGAG
CAGGTTCAGC AGATCCAGAA TCTGATCCTG CAAGGCTACA AGGCGATTGC CGTCGATGCG
GTTTCGCCGA CCGCGCTTAA CGGTGTGATC AAGCAGGCGT GCGGCGCGGG CGTGACAGTC
GTGTCGTTCG ACGGAATCGC GACCGAACCG TGCGCGTATC GGATCGCGGT CGATTTCCAG
GGCATGGGCC GCATGCAGGT CGATTATCTG GCGAAACGTT TGAACGGCAA GGGCAACCTG
CTGGAAATCC GTGGGCTCGC GGGCGTCTCA GTGGATGACG AGATTCACCA AGGCGTAGCG
GATGAACTGA AGAAGTATCC GGGGCTGAAG ATCGTCGGCT CGGTACATGG CGACTGGACG
CAGACCGTCG CGCAAAAGCA GGTCGCGGGC ATTTTGCCGA CACTGCCGAA GATCGATGGG
GTCGTCACCC AGGGCGGCGA CGGATTCGGC GCCGCACAGG CGATCAAGGC CGCAGGACGG
CCGACGCCGA TCATCATTCT CGGCAACCGC CAGGAAGAGC TTGCATGGTG GGCCGATCAG
AAGAAGGGCG GCTATGAGAC GATGTCGGTG ACGATTCCGC CGGGCGCGTC GACGTTCGCG
TTCTGGGTCA CGCAGCAGAT CCTGGCCGGC AAGAAGGTGC CGCACGATAT CCGCATGCCG
GTTCTCGAAG TGAAGCCGGA CGAACTCGAT GCCGTGCTCG CAAAGACGCC GGCGGGCGCG
CTTGCGAACA AGGTGTACAC CCGCGACGAG GTGGTCGCGG TGGTCGATGG GAAGAAGTGA
|
|---|
| Protein sequence | MKMAAIAVAL CLAAASVGAS AQVATGDTSS MKIALSNNYA GNSWRQQMLK SWSSVADPAV
KQKIVAAAPS FTTAESQATE QVQQIQNLIL QGYKAIAVDA VSPTALNGVI KQACGAGVTV
VSFDGIATEP CAYRIAVDFQ GMGRMQVDYL AKRLNGKGNL LEIRGLAGVS VDDEIHQGVA
DELKKYPGLK IVGSVHGDWT QTVAQKQVAG ILPTLPKIDG VVTQGGDGFG AAQAIKAAGR
PTPIIILGNR QEELAWWADQ KKGGYETMSV TIPPGASTFA FWVTQQILAG KKVPHDIRMP
VLEVKPDELD AVLAKTPAGA LANKVYTRDE VVAVVDGKK
|
|---|
| |