| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5148 |
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| Symbol | |
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| ID | 6246642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2260139 |
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| End bp | 2262514 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642596878 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001861281 |
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| Protein GI | 186473939 |
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| COG category | [C] Energy production and conversion
[K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG2421] Predicted acetamidase/formamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.113403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.388231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTTAC TGCGTTTCAC CACCGAGTCG TATGCCGAGA CAGATCGCCG GCGCGCATGG
ACCGAGGCGC TCGACCGGCT TGGCCTGCAC TGCGGCGTCC CTCTTGCTGC CGGGCGCCCA
TTGCATGGAA CCATTACGTC ACGCAGGTCC ACAAGCGGCT TTGAGCTGAT CGCGCTGGCC
GCATTCGCGC AAACGATCGA GTTCAAGGTC GACGGCGCCG ACACTCTCAT GATCGTGCTA
CATCTCGACG GCGGCGTGAC GCTCGTCGCC GACGGCGTGC GCGCCCGGAT TGCAACTGGC
GATATCATTT ATGCGTCGTC GCGCGAAGAA GCCCACCTGG CGTTCACATC CGACTTCCGC
GCGTTCGCAA TCCGCGTACC CCGATCCGCC ATCAATGCAC GCCTTCTTAC GCCGTTCTCG
CTACGTGCCG GGCGTTTGCC CGGCGAGGCC GGCATCGGTC ACGTGTTCTC CGGCTTTCTG
CGCTCGATTG CCGAAAGCAT GGAGACGTTA ACGCTCGACG AGTTGCGCCC CCTCGAACTC
GCACTCGCGG AATTTCTGGT CGCGAGTCTC GCCGCTCACG ACAAGGAAGG CAGTTTCAGC
GGACTCACGC CGTCTCAGGC CGCGATCTTC TCGCGAGTGT GTCGGACCAT CGAGGGCAAT
CTCGCCAACC CCGATCTGGG GCTGACATCC ATAGCCAAAG AAGAGCGCGT CTCGCCGCGC
TATCTGCAGA AACTGTTCGA AGCGGTTGGA CAGAATTTCT CGATCTACTT GCGCTCGCGC
AGGCTGGAAC GCTGCCGCGC GGAGTTGGTG AATCCGCTGT ATGAAAAGGT TTCGATTGCC
GATGTCTGTT TCCGCTGGGG TTTCAACGAT CCCGCGTACT TCAGCCGGGT GTTCCGCGAG
CAATATGGCG CGTCGCCGCG CACCTTTCGG CATGAAGCGG GTCTCGAATT AGCACGCCAT
CTCGTGCGGC GAATCTCGCG CGGCTTGCCT GTCAATGCCG GGAGTTTGAT CGTACATGCA
CAACTTGCCG AGCAGGGTGC GGCCCATGAA GTTGCAGATG AGGCCGACTC TGCCGAGCAG
CCTGAAGCGC CCGCGGCACA AGCACAGCGC GAGTCCGGCA AGCCGCGTCA TCATCTGTTG
CGTGCAACGG CCAACACCAT CCACTGGGGA TACTTCAGTC ACGATCTTAA GCCCGTGCTC
GAAGTGAACA GTGGCGACAC GGTGACGATC GAAACGCTCA CGCAACACGC GGCGGACGAC
TGGGAGCGTA TGGTGCAAGG CGATCCTGGC GCCGAAAGTG TGTTCCATTG GACTGCTGGA
CGCAAGAACG TCAACCGCCG CGGCGCTGGG CCCATGGACG CGTCTATCTA CGGACGTGGT
GCGGGAGAAG GCATCGGCGT GCATATCTGC ACAGGTCCTA TCGCCGTGCG TGACGCGGAA
CCGGGTGATG TTCTGGAAGT GCGTATTGTC GATATCCATC CGCGTGGTTG CGCCAATCCG
AAATTCGCCG GCCGCGTGTT CGGCAGCAAT GCCGCTGCAT GGTGGGGCTT TCACTATCGC
GAGCTATTGA CCGAGCCGAA GCCGCGCGAG GTCGTCACGA TATATGAGAT CGACGACGCC
GCCACCGCTG GCGAAACCGC CTACGCCCGC GCGGTCTATA ACTTCCGCTG GACGCCTCAG
CGCGATCCCT TTGGAGTGAT GCATCCGACG ATCGATTATC CCGGCGTGCC GGTCGATCAT
TCGACGGTTG TCGAGAATCA CGACATCCTG AAGAATGTCA AAATCCCCGT GCGCCCGCAC
TTCGGCGTGG TCACCGTCGC ACCGCAACAG GACGGTCTGA TAGATTCGAT TCCACCGTCC
ACTTTCGGCG GCAATCTCGA CAACTGGCGC GTAACGCGCG GCGCGAGCGT CTTCCTGCCA
ATCGGGGTAC CCGGCGCGCT GCTCTCCGTT GGCGACCCGC ATGCATCGCA AGGAGACTCC
GAACTGTGCG GCACTGCGAT CGAGTGCTCT CTGACTGGTG ACTTCCAACT GGTGCTTCAT
AAAAGAGATA CGTTAAGCGG CCAGCCGTTT GCAGACCTCA CCTACCCACT GGTCGAAACC
GCCGACGAAT GGGTTCTTCA CGGCTTCAGT TATCCAAACT ATCTCGCCGA GTTTGGCACG
AACGCGCAAA GCGCGGTGTA TGAAAAATCG ACCCTCGACC TCGCGATGCG CGACGCGTTC
ATCAAAACGC GGCGCTTCCT GATGACGACC AAAGGCCTGT CCGAAGATGA GGCGATCTCG
CTCATCTCCG TCGCGGTCGA CTTCGGCGTG ACACAGGTAG TGGACGGCAA CTGGGGTGTT
CACGCGATCA TCCGAAAAGC GCTATTCAAC TCGTGA
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| Protein sequence | MDLLRFTTES YAETDRRRAW TEALDRLGLH CGVPLAAGRP LHGTITSRRS TSGFELIALA
AFAQTIEFKV DGADTLMIVL HLDGGVTLVA DGVRARIATG DIIYASSREE AHLAFTSDFR
AFAIRVPRSA INARLLTPFS LRAGRLPGEA GIGHVFSGFL RSIAESMETL TLDELRPLEL
ALAEFLVASL AAHDKEGSFS GLTPSQAAIF SRVCRTIEGN LANPDLGLTS IAKEERVSPR
YLQKLFEAVG QNFSIYLRSR RLERCRAELV NPLYEKVSIA DVCFRWGFND PAYFSRVFRE
QYGASPRTFR HEAGLELARH LVRRISRGLP VNAGSLIVHA QLAEQGAAHE VADEADSAEQ
PEAPAAQAQR ESGKPRHHLL RATANTIHWG YFSHDLKPVL EVNSGDTVTI ETLTQHAADD
WERMVQGDPG AESVFHWTAG RKNVNRRGAG PMDASIYGRG AGEGIGVHIC TGPIAVRDAE
PGDVLEVRIV DIHPRGCANP KFAGRVFGSN AAAWWGFHYR ELLTEPKPRE VVTIYEIDDA
ATAGETAYAR AVYNFRWTPQ RDPFGVMHPT IDYPGVPVDH STVVENHDIL KNVKIPVRPH
FGVVTVAPQQ DGLIDSIPPS TFGGNLDNWR VTRGASVFLP IGVPGALLSV GDPHASQGDS
ELCGTAIECS LTGDFQLVLH KRDTLSGQPF ADLTYPLVET ADEWVLHGFS YPNYLAEFGT
NAQSAVYEKS TLDLAMRDAF IKTRRFLMTT KGLSEDEAIS LISVAVDFGV TQVVDGNWGV
HAIIRKALFN S
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