| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5145 |
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| Symbol | |
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| ID | 6246639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2256409 |
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| End bp | 2258112 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642596875 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001861278 |
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| Protein GI | 186473936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.900628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTT TGCGTATCAA ACAGAAGATC GTCTGCGCCC TCGGTATGGC GGCCATGTTC
GCATTGCAGC CAGCGATGGC CGCCGGCCTC GATCGCGTTC AGGTGCTCGA CGGTTTCAAA
GAACTGGCAG CTTACGTCGG CTCGCCGTTC CTGCTCGGCG GCGCGTGGGT TGCGGTGAAG
ATCACGCTGA TTGCGATGTC GATCGGGCTG GTGCTCGGGC TCGGTCTTGC GCTGATGCGG
CTGTCACGGT TCAGGGCCCT GGACTCAGCA GCGTGGAGCT ATATCTGGTT CGTGCGCGGC
ACACCGCAAC TGCTGCAACT CGTATTCATC TTCGACGCTT TGCCGCTGAT CGGTTTGCGT
TTCGACGAAG TCACGACTGC GGTTATCGGC TTCGCCTTGA ACGAAGCGGC GTTCAGCGCC
GAGCTGTTTC GTGCCGGAAT CCTGTCGGTG AACCGTTCGC AATCGACCGC GGCGGCCGCT
CTCGGCATGG GACCGTTGCT GACGTTGCGC CGCATTGTGC TGCCGCAATC GATGCGCGCG
GTGATCCCCG GTCTCGCCAA CGACACCATC GGCATGTTGA AGCTGACGTC GATCGCGTCG
GTGATCTTCG TCAACGAGCT CACATTTCGC TCGCAACAGG TCGTCGGGCA GAACTTCAAG
TTCTTTACCG TGTTCGGCGC GGCGGCGGTG ATTTATCTGA TCCTGACGAG CGGGGTCTCA
TTGCTTCAGG TGTGGCTCGA ACGCATCTTC GATCACGAGC GCGACCGAAA GCTCACGTTC
TCGTGGTTCG GACTGCGTGC ATCGGCGAGT GATGTGAAAC CTCTTGACGC ACCGATTGCT
TTGCCCGTCG CCGCCAAAAC GCCAGAGCCG AACGGTCACG CATGGATCAG CACCCTGTTG
CCTGACGAAA GCCGCACGCC GCGTCGGTGC GATGAACCGT TTGTCGTATG CAAGAACGTC
TGGAAATCAT ATGGCAAACG CGAGATTTTA CGCGGCGTCG ACCTGTCGAT CGCGCATGGC
GAAGTGGTCG TAATACTCGG CCCGAGCGGT TCCGGCAAAA GCACGCTGCT CAAGCTCATC
AACCATCTCG AACCGCTTGA CTGGGGAACG ATCAAGGTCG ATTCGCAGTA TGTGGGCTAT
CGCGAAGTGC CGGGTGGCGG CGGCACGGTG CGGCCCCTGC GCAATCTCGC ACGTGCACGC
GCCGAAGCCC GCGTGGGCAT GGTGTTCCAG CATTTCAATC TGTTTAGTCA TTTGAGTTCG
CTCGACAATA TCGTTGAAGC ACAGCGTCAC GTCTATGACG TGCCGCGTGC GGAGGCGGAA
GCCCTCGGGC GCGAGCTGTT GAGGAGCGTG GGCCTCGCCG AACACGCGGA TTTTTTGCCG
CACCGGTTAT CGGGCGGACA GCAGCAGCGC GTGGCGATTG CACGCGCGCT CGCGATCAAG
CCCAAGTTGA TGCTCTTCGA CGAACCGACT TCGGCGCTCG ATCCAGAACT GGTCGGCGAA
GTGCTTGGCG TGATGCGCGG GCTTGCCGAT GCCGGCATGA CGATGGTCGT GGTCACCCAC
GAAATCCGCT TTGCCCGCGA TGTCGCTGAC CGTGTCGTCT TCATGGACGG CGGCGAAGTG
ATCGAGCAAG GGACGCCGCA GCAGGTCATC GACAACCCGA CTGAAGAGCG CACCCGAAAA
TTTCTTAACG TCGTTGCCAA TTAA
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| Protein sequence | MKALRIKQKI VCALGMAAMF ALQPAMAAGL DRVQVLDGFK ELAAYVGSPF LLGGAWVAVK
ITLIAMSIGL VLGLGLALMR LSRFRALDSA AWSYIWFVRG TPQLLQLVFI FDALPLIGLR
FDEVTTAVIG FALNEAAFSA ELFRAGILSV NRSQSTAAAA LGMGPLLTLR RIVLPQSMRA
VIPGLANDTI GMLKLTSIAS VIFVNELTFR SQQVVGQNFK FFTVFGAAAV IYLILTSGVS
LLQVWLERIF DHERDRKLTF SWFGLRASAS DVKPLDAPIA LPVAAKTPEP NGHAWISTLL
PDESRTPRRC DEPFVVCKNV WKSYGKREIL RGVDLSIAHG EVVVILGPSG SGKSTLLKLI
NHLEPLDWGT IKVDSQYVGY REVPGGGGTV RPLRNLARAR AEARVGMVFQ HFNLFSHLSS
LDNIVEAQRH VYDVPRAEAE ALGRELLRSV GLAEHADFLP HRLSGGQQQR VAIARALAIK
PKLMLFDEPT SALDPELVGE VLGVMRGLAD AGMTMVVVTH EIRFARDVAD RVVFMDGGEV
IEQGTPQQVI DNPTEERTRK FLNVVAN
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