Gene Bphy_5124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5124 
Symbol 
ID6246618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2230807 
End bp2232333 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content69% 
IMG OID642596854 
Producthypothetical protein 
Protein accessionYP_001861257 
Protein GI186473915 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.417825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTC ATCGGGCCCT GCTGCTCGCG CTGACGGTCT GCTGCGCGGC AGCCTTCGCC 
CCTTGCGCTC GCGCTGCGCA GCCGGCCGTC GTGCCCGGCA GCGTGGTCGT GATTCCCATT
GCGGGCGCAA TCAGCCCCGC CACCGCGGAC TTCATCGTGC GCGGCCTCGC CCGAGCCGCC
GAAGACCACG CGCAGCTCGC CGTCCTGCAA CTCGATACGC CAGGCGGACT CGATACCTCG
ATGCGGCAGA TCATCAAGGC AATTCTCGCG TCGCCCGTGC CCGTCGCGAC CTATATCGCG
CCAGGCGGCG CGCGCGCCGC GAGCGCGGGC ACCTACATCA CGTATGCGAG CCACATCGCG
GCGATGGCGC CCGGCACCAA TCTCGGCGCT GCGTCGCCCG TGCAGCTCGG CATCGGCGGG
CAGGACGCGC CGCGGCCCAG CCAGCCGGCA GCGTTGCCGG GCGCAGCGCC ATCCTCGAGC
CCGTCATCGA ACCCGGCCGT CAAGGACAAC GCTGCTTCGG GCGCGCTCGC GCTCGACAGT
CAATCGACGG AACTGCGCAA GCAGCTTCAC GACGCGCAGG CGTATATCCG CGGACTCGCG
CAACTGCGCG GCCGCAACGT CGAGTGGGCC GAGCGCGCGG TGCGCGAAGC CGTGAGCCTG
TCGGCGCGCG ACGCGCTCGA GCAGAAAGTG GTCGATATTG TCGCGCGCGA TCTCCCCGAC
CTGCTTCGGC AGCTCGACGG GCGCACCTAC GACACGGCAG CCGGCGCGCA GCACCTGACG
ACGGCGCACG CGCCCGTCGT CACGCTCGAA GCGGACTGGC GCAACCACTT CCTCGCCGTC
ATCACCGACC CAAATGTGGC CTTGATCTTG CTGATGATCG GGATGTATGG GCTGTTCTTC
GAGTTCGCGA ATCCCGGCTT CGTCTTGCCC GGCGTCGCGG GCGCGATCAG CCTGCTGCTG
GGACTGTTCG CGCTGCAACT GCTGCCCGTC AATTACGTGG GTCTCAGTCT GATCTTCCTC
GGCCTGGCAT TCCTGATCGC TGAAGCGTTT CTGCCGACCT TCGGCGCGCT CGGCTTCGGC
GGCATCGTCG CGTTCGCGAT CGGCGCACTG ATGCTGATCG ATACCGACGT GCCCGGCTAC
GGCATTCCGC TGCCGATGAT CGCCGCCGTC GTCGTCTTCA GCGTGCTGTT CATTTTCGGC
GTATCGAGCC TCGTGCTGCG CTCGCGGCGG CGGCCCGTCG TGACGGGCGC CGAAGCGATG
ATCGGCAGCT TCGGCGTGGT GCTCGACGAC GGTCTGGTCG CCGTCGACTC CGATGCAATG
GAAAGCCGCC CCGAGGTCCG GGCGGACAGC CTGCTGCATG GCGAACCGGA ACGCGTCGGC
TGGGCGCGCG TGCATGGCGA GCGCTGGCGC GTCTGCAGCA ACGCGCCACT TGCGGCGGGC
AACGCGGTGC GCGTAACCGG GCGGCGCGGC CTGATGCTCA CCGTCGTGCC CGCGAACCCT
GCCCCATCAC AAGGAGAACG CACATGA
 
Protein sequence
MRLHRALLLA LTVCCAAAFA PCARAAQPAV VPGSVVVIPI AGAISPATAD FIVRGLARAA 
EDHAQLAVLQ LDTPGGLDTS MRQIIKAILA SPVPVATYIA PGGARAASAG TYITYASHIA
AMAPGTNLGA ASPVQLGIGG QDAPRPSQPA ALPGAAPSSS PSSNPAVKDN AASGALALDS
QSTELRKQLH DAQAYIRGLA QLRGRNVEWA ERAVREAVSL SARDALEQKV VDIVARDLPD
LLRQLDGRTY DTAAGAQHLT TAHAPVVTLE ADWRNHFLAV ITDPNVALIL LMIGMYGLFF
EFANPGFVLP GVAGAISLLL GLFALQLLPV NYVGLSLIFL GLAFLIAEAF LPTFGALGFG
GIVAFAIGAL MLIDTDVPGY GIPLPMIAAV VVFSVLFIFG VSSLVLRSRR RPVVTGAEAM
IGSFGVVLDD GLVAVDSDAM ESRPEVRADS LLHGEPERVG WARVHGERWR VCSNAPLAAG
NAVRVTGRRG LMLTVVPANP APSQGERT