| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5120 |
|---|
| Symbol | |
|---|
| ID | 6246614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2225549 |
|---|
| End bp | 2226946 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642596850 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001861253 |
|---|
| Protein GI | 186473911 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.204733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG CAATCTCCGC CTTCGATCTC GCACGCCTTC AGTTCGCGTT CACGGTTTCG
TTTCACATCA TCTTTCCTGC CCTCAGCATC GGCCTCGCCA GCTTCATCGC CGTCCTCGAA
TGGCGCTGGC TAAAAACCAG TAAGGCCTAC TACAAAGATC TTTGCCTGTT CTGGTCGAAG
ATCTTCGCGG TGGCCTTCGG CATGGGTGTC GTGTCCGGCG TCGTCATGAG CTACGAGTTC
GGCACCAACT GGTCCGGCTT CTCTGCGTTC GCCGGCCCCG TCACGGGGCC GCTGCTGATG
TACGAAGTGA TGACGGCGTT CTTCCTCGAA GCAGGCTTCC TTGGCATCAT GCTGTTCGGC
TGGCAACGCG TCAGCCCGCG CGCACACTTC GGCGCGACGC TGATGGTCGC GATCGGCACG
CTGATCTCGA CATTCTGGAT TCTCGCGTCC AACAGCTGGA TGCAAACGCC GCAAGGCTTC
GACATCGTCG ACAACCACGT CGTCCCCGTC GACTGGTTCA AGATCATCTT CAATCCTTCC
TTCCCGTACC GCCTCGCGCA CATGGCGATC GCCGCGTTCA TCGTCACCGC GCTCGTCGTC
GCCGCTGTCG GCGCCTGGCA TCTGCTGAAA GGCCGGCGCG ACAACGCGGT GAAAAAGATG
TTCTCGATGG CGCTGTGGAT GCTGCTGGTG CTCGCGCCCG TCCAGGCCTT CGTCGGCGAC
GCGCACGGTC TCAACACGCG CGAATACCAG CCTGCAAAAA TTGCGGCGAT CGAAGGTCTG
TGGGACACCG AACAAGGCGG CACCGCGCTG AACCTGTTCG GCATCCCCGA CATGCAGGCC
GAAGCAACGA AGTACGCGGT ATCGATTCCG CACCTCGGCA GCCTGATCCT CACGCATAGC
TGGGACGGGG AAATCCGCGG ACTGAAGAGC TTCCCGAAAG AAGAGCGGCC GAATTCCACG
GTCGTGTTCT GGAGCTTCCG CGTGATGGCG GGCCTCGGCG TGGCGATGAT CGTCTTCGCG
CTCGCCGCCT GGGCGCTGCG CCGGCGCGGC AAACTGTACG ACGCGAAATG GTTTCAGCAC
ATCGCGATCG CAATGGGACC GACGGGCTTC CTGTCGCTGC TCGCGGGCTG GGTCACGACG
GAAGTCGGCC GTCAGCCGTG GGTCGTGTAT GGCGTGAAGC GCACCGTCGA AGCCGTGTCG
CCGCTTTCCG CGCAACAGGT CGGCATTTCG CTGATGGCGT TCATCGTCAT CTACTTCCTC
GTGTTCGGCA CGGGCATCTA CTACATGTTC AAGCTGATGC GCTCGGGCCC CGCGCTGCCG
GGCCACGCGC CCGACGGCCT GCCCTCCCGT CCGAAGCACA CCGTGCGCCA TCCGCTCGAT
CAGATGATCG ACGCCTGA
|
|---|
| Protein sequence | MNTAISAFDL ARLQFAFTVS FHIIFPALSI GLASFIAVLE WRWLKTSKAY YKDLCLFWSK
IFAVAFGMGV VSGVVMSYEF GTNWSGFSAF AGPVTGPLLM YEVMTAFFLE AGFLGIMLFG
WQRVSPRAHF GATLMVAIGT LISTFWILAS NSWMQTPQGF DIVDNHVVPV DWFKIIFNPS
FPYRLAHMAI AAFIVTALVV AAVGAWHLLK GRRDNAVKKM FSMALWMLLV LAPVQAFVGD
AHGLNTREYQ PAKIAAIEGL WDTEQGGTAL NLFGIPDMQA EATKYAVSIP HLGSLILTHS
WDGEIRGLKS FPKEERPNST VVFWSFRVMA GLGVAMIVFA LAAWALRRRG KLYDAKWFQH
IAIAMGPTGF LSLLAGWVTT EVGRQPWVVY GVKRTVEAVS PLSAQQVGIS LMAFIVIYFL
VFGTGIYYMF KLMRSGPALP GHAPDGLPSR PKHTVRHPLD QMIDA
|
|---|
| |