Gene Bphy_5115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5115 
Symbol 
ID6246609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2220418 
End bp2222247 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content67% 
IMG OID642596845 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001861248 
Protein GI186473906 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0345398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCCG ATCCCATCCA GCGCGCCATC GACGAAGACC TCGTGCGCGT GCTGTACGCG 
CAGGACCCGA TTGCCTTCTT CACGCACTGG TTCTCGATTG CCGTGCTGGT GGCGATCTAT
TGGAATAACA TCCCGCATCC GCATCTTTTC GCGGCCTGCT TCATCTTCTA TGGCTTCGCC
AATTGCGCGA GCCTTGCGCT GTGGATGTGC AACCGGCGCT GGCCCGAAGC CGTGTCGCCG
CGCACGTGGA TCAACCTGCA CGCGGCGCGC GGCGCGCTGC TCTATGCCGC GCCGGGCCTG
GCCATCTGGT TCGCGTTCCA GAGCCCGCAC ACGGATCTGC CCATCCTGCA CACGGTGATG
CTGGTCACGC TGGCGGCGGG CGTGTTCATG TCGAACGGCT TCGACGTCGC CAACTTCGTG
ACGGCGATTC CCTTTCTCCT GTTGCCGGCG ATCGTGCTGC ACTTCGGCAC GCATACATTC
GACCGCACGA TTCTCGCGAT CGTCCTCGCG TTCTTCTTCT GCGCGATCAA CGTGTACGCG
CTCAGCTACC GAAAGCTGTT CCAGCGCGTC GTGCAGGCGC GCGTCGATCA GCAGGCGCTG
GCCGAATCGC TCGCCGCTCA GAAACTCGTC GCCGAAGAGG CGAGCCTCGC GAAGACGCGC
TTCTTCGCCG CGGCCAGCCA CGATCTGCGT CAGCCGCTGC ATGCAATCGG GTTGCTCGCG
GCATCGTTGA ACGACTCGTC GGCCACGCCC GTGCAGCACG CGAAGACGGC CAGCAACATC
GCCAATAACG TCGAGGCGTT GAACCAGCTA TTCAACCAGG TGCTCGATCT CGCGCGGCTC
GAAAGCGGCG TCACGCAAGT CATCAGGCTG CATTTCCGGC TCTCGGAACT GTTCGACCGC
GTCGGCAGCC AGTACTGGCC GCAAGCGGCC GCGAAAGGGC TGGCGCTGCG CATCGCGCCG
ACAGACGCGG TGATTCACGA TGACCCCGTG CTGCTGGAGC GGATTTTGAG CAACCTGCTG
TCGAACGCGG TGCGCTACAC GGAAGCCGGC GCGATCTGGA TGGGCTACCG GCGCGCGGGG
CAGCGCGAGG GCGGCTATAT CGAAGTGCGC GATTCGGGCA TCGGCATTCC GAAGGCCGAG
CAGGAGCGCA TCTTCGAAGA GTTCTATCAG GTCGCCAATC CGCGGCGCGA CGCGCGCCAG
GGGCACGGCC TCGGGTTGCC GACCGTCAAA CGGCTGGTCG AGATGCTCGG TGGCAAACTG
CAATTGCGCT CCACGCCGGG GCGCGGCTCC GTGTTCCGCT TTCCCGTGCG CGCAGGCGAT
CCGCTGAGGA TTGTCGCCGG GCTCAACGAT TCGACCGTCA GCGGCGCGGC GGCGCTTGGG
CGCCATGTGC TCTGCATCGA CGACGAACCG GCCATCCTGG AGGGCATTGA GAGCTTGCTC
GGGCGCTGGG GCTGCGTGGT GCGTGGCGTG CCCGACGAGC CTCACGCGCT GCAGGCCATC
GACGAAGGCT TCATGCCCGA CGCCGTTCTG TGCGATTACC AGTTGGCCAA CCACCGGACA
GGCGCGCAGG CGCTCGGCGC GGTGCGCGAG GCGTTGCGGG GGCGCGGCCG GGAGCGCGTC
GTGACGCTGC TGATTACGGG CGACATGGCG TCGGTCGAGC TGGAAGCCCT GGCGTTGCAG
GGCATTCCCG TGCTGCACAA GCCGGTGACG CCCGCGCGGC TGCGCCGCAC GCTCGAGATG
CTGTGGCAGC AACCGGGCGC CGTCGCGGAC GCGCCAGGCG AGCGCGCGCA ACGGGTGACG
GCGCAACAGC CTGCCACCAC GCGCGGCTGA
 
Protein sequence
MRADPIQRAI DEDLVRVLYA QDPIAFFTHW FSIAVLVAIY WNNIPHPHLF AACFIFYGFA 
NCASLALWMC NRRWPEAVSP RTWINLHAAR GALLYAAPGL AIWFAFQSPH TDLPILHTVM
LVTLAAGVFM SNGFDVANFV TAIPFLLLPA IVLHFGTHTF DRTILAIVLA FFFCAINVYA
LSYRKLFQRV VQARVDQQAL AESLAAQKLV AEEASLAKTR FFAAASHDLR QPLHAIGLLA
ASLNDSSATP VQHAKTASNI ANNVEALNQL FNQVLDLARL ESGVTQVIRL HFRLSELFDR
VGSQYWPQAA AKGLALRIAP TDAVIHDDPV LLERILSNLL SNAVRYTEAG AIWMGYRRAG
QREGGYIEVR DSGIGIPKAE QERIFEEFYQ VANPRRDARQ GHGLGLPTVK RLVEMLGGKL
QLRSTPGRGS VFRFPVRAGD PLRIVAGLND STVSGAAALG RHVLCIDDEP AILEGIESLL
GRWGCVVRGV PDEPHALQAI DEGFMPDAVL CDYQLANHRT GAQALGAVRE ALRGRGRERV
VTLLITGDMA SVELEALALQ GIPVLHKPVT PARLRRTLEM LWQQPGAVAD APGERAQRVT
AQQPATTRG