Gene Bphy_5102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5102 
Symbol 
ID6246596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2204688 
End bp2205440 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID642596832 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001861235 
Protein GI186473893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00180467 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00233971 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTTTTG ATTTCGACTT TCTGTTCGAC ACGTTGCGCC AGCTGCTCGG CGCCGTGCCG 
ACCACGCTGG GGCTGTTTTT TTCATCGCTG GTGCTGGGCG GTCTGCTGTC GCTCGTGATC
GTCACCATGC GCGTGTCGCC GCACTGGCTG CCCAATCGCT TTGCACGTGC GTACATTCTC
GTGTTTCGCG GTTCACCGCT GCTGATCCAG ATGTTTCTCG TTTATTACGG GCTTGGCCAG
TTCGGCGTGA TCCGCGAGAG CTTTTTATGG CCTGTGCTGC GCGAGCCTTA TGTGTGCGCG
GTGCTCTCGC TTGCATTGTG CACGGCAGGC TATACGGCGG AAATCATTCG CGGCGGTCTG
ATGGCCGTGC CTGTCGGACA GATCGAAGCG GGTTACTCGA TCGGCCTGTC GGGCTTCTCG
CTCCTGCGCC GCATCATCGG CCCGATTGCG TTGCGCCAGT GCCTGCCCGC GTATTCGACG
GAGGCCGTGC TGCTCGTCAA GTCGACCGCG CTCGCGAGCC TCGTCACCGT ATGGGAAGTG
ACGGGCGTCG CGCAGCAGAT CATCCAGCAG ACGTACCGCA CGACAGAAGT GTTCATCTGC
GCCGCGTTGA TCTATCTGTT CCTGAACTTT GTCGTCGTGC GCCTGCTCGG CCTGCTCGAA
CGGCGTCTGT CGCGGCATCT GCGCGCGATG CCCGTGAACG CCGCGCCCCG CGCGATCGCA
CCCGCCACCG AAGCACGTCG TGCCGCACAC TGA
 
Protein sequence
MSFDFDFLFD TLRQLLGAVP TTLGLFFSSL VLGGLLSLVI VTMRVSPHWL PNRFARAYIL 
VFRGSPLLIQ MFLVYYGLGQ FGVIRESFLW PVLREPYVCA VLSLALCTAG YTAEIIRGGL
MAVPVGQIEA GYSIGLSGFS LLRRIIGPIA LRQCLPAYST EAVLLVKSTA LASLVTVWEV
TGVAQQIIQQ TYRTTEVFIC AALIYLFLNF VVVRLLGLLE RRLSRHLRAM PVNAAPRAIA
PATEARRAAH