Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5102 |
Symbol | |
ID | 6246596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2204688 |
End bp | 2205440 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642596832 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001861235 |
Protein GI | 186473893 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00180467 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00233971 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTTTTG ATTTCGACTT TCTGTTCGAC ACGTTGCGCC AGCTGCTCGG CGCCGTGCCG ACCACGCTGG GGCTGTTTTT TTCATCGCTG GTGCTGGGCG GTCTGCTGTC GCTCGTGATC GTCACCATGC GCGTGTCGCC GCACTGGCTG CCCAATCGCT TTGCACGTGC GTACATTCTC GTGTTTCGCG GTTCACCGCT GCTGATCCAG ATGTTTCTCG TTTATTACGG GCTTGGCCAG TTCGGCGTGA TCCGCGAGAG CTTTTTATGG CCTGTGCTGC GCGAGCCTTA TGTGTGCGCG GTGCTCTCGC TTGCATTGTG CACGGCAGGC TATACGGCGG AAATCATTCG CGGCGGTCTG ATGGCCGTGC CTGTCGGACA GATCGAAGCG GGTTACTCGA TCGGCCTGTC GGGCTTCTCG CTCCTGCGCC GCATCATCGG CCCGATTGCG TTGCGCCAGT GCCTGCCCGC GTATTCGACG GAGGCCGTGC TGCTCGTCAA GTCGACCGCG CTCGCGAGCC TCGTCACCGT ATGGGAAGTG ACGGGCGTCG CGCAGCAGAT CATCCAGCAG ACGTACCGCA CGACAGAAGT GTTCATCTGC GCCGCGTTGA TCTATCTGTT CCTGAACTTT GTCGTCGTGC GCCTGCTCGG CCTGCTCGAA CGGCGTCTGT CGCGGCATCT GCGCGCGATG CCCGTGAACG CCGCGCCCCG CGCGATCGCA CCCGCCACCG AAGCACGTCG TGCCGCACAC TGA
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Protein sequence | MSFDFDFLFD TLRQLLGAVP TTLGLFFSSL VLGGLLSLVI VTMRVSPHWL PNRFARAYIL VFRGSPLLIQ MFLVYYGLGQ FGVIRESFLW PVLREPYVCA VLSLALCTAG YTAEIIRGGL MAVPVGQIEA GYSIGLSGFS LLRRIIGPIA LRQCLPAYST EAVLLVKSTA LASLVTVWEV TGVAQQIIQQ TYRTTEVFIC AALIYLFLNF VVVRLLGLLE RRLSRHLRAM PVNAAPRAIA PATEARRAAH
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