| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5089 |
|---|
| Symbol | |
|---|
| ID | 6246583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2192422 |
|---|
| End bp | 2193729 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642596819 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001861222 |
|---|
| Protein GI | 186473880 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.177988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.026694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATT CATCGATATC GGACAGTGCG GGCATCGCGC GGCGGAAGAC ACCGTTGAAC
CGGTCGCAGA TCGCCGGCTT CTGGGGCGCA TGGGCGGGCT GGACGCTGGA CGGCATGGAC
TCGTTCATTT ACGCGCTGGT GCTGACGCCG GCGCTCACCG AGTTACTGCC GCGCTCGGGC
TACGCGGCGA CGCCTGCGAA CGTCGGCCTG GCCGGCTCGA TCCTCTTTGC GCTGTTCCTT
GTGGGATGGG GGCTGTCGTT CATCTGGGGG CCGCTCGCGG ACCGATTCGG CCGCACGCGC
GTGCTGGCGG GCACGATCTT CACGTTCGCG ATTTTCACTG GCCTGTCGGC GACCGCGCAT
AACGTGTGGG AGCTGGGCAT CTATCGCTTC ATTGCGGGCG TCGGCATCGG CGGGGAATGG
GCGTTGGCGG GGACGTATGT CGCGGAAGCG TGGCCCGAGG ATCGCCGCAA GATGGGCGCG
GGCTATTTGC AAACGGGTTA TTACGCGGGC TTTTTCCTCG CGGCTGCGCT GAACTACACG
GTGGGCGTGC ACTTCGGCTG GCGCGCGATG TTCCTGACGG GCGCGGTGCC TGTGTTCGTC
GCGATCATGA TCCTGACGCG CGTGAAGGAA TCGGAGAAAT GGCAGCGGGC GGAAGCGCGC
GACGTGGTGC ATGTCAAGCC GATGCGGGCG ATTTTCGCGC CGACGTATCG CCGTCGCACG
TGGGTGATGT GCGCACTGTT GACGATTGCG ATCATCGGTT TGTGGGCGGG CGCCGTGTAC
GAGCCGTCGG CGGTGATCCA GCTGGCGACG CGGGCGGGGA TGGCGAAGCC GGAAGCGACG
AAGATGGCGT CGATGGCGAC GGGGTTGCTG TCGATCGGCA CGATACTTGG CTGTCTCGCG
CTGCCGCCGC TGGCTGAGCG GATTGGCCGC AAGAAGACGC TTGCGATTTA TTTCGGCGGG
ATGGCTGTGG CGATTGTGGG CGCCTTCGGC TGGGCGTTCT ATCTGCCGAA CGGGCTTGCA
CCGTTTATCG CGTGGCTGTT TGTGCTTGGG TTCTTCGGCG GTAACTTTGC GCTCTTTAGC
CTGTGGTTGC CCGAGCTGTT CGAGACGCGT GTGCGGGCGA CTGCTTTTGC GTTTTGTACC
TCGTTTGGAC GGTTTGTTGG GGCGGGGGTT AATTTTCTGC TGGGCGCGGC TGTGTTGAGT
ATGCATACCC TTGGGGTGCC CGTTGCGCTG ACCGCGATTG CTTTTGTTCT TGGGTTGCTG
GTCATTCCGT TTGCCAAGGA AACCAAAGGA GAGGTCTTGC CGCAATGA
|
|---|
| Protein sequence | MLNSSISDSA GIARRKTPLN RSQIAGFWGA WAGWTLDGMD SFIYALVLTP ALTELLPRSG
YAATPANVGL AGSILFALFL VGWGLSFIWG PLADRFGRTR VLAGTIFTFA IFTGLSATAH
NVWELGIYRF IAGVGIGGEW ALAGTYVAEA WPEDRRKMGA GYLQTGYYAG FFLAAALNYT
VGVHFGWRAM FLTGAVPVFV AIMILTRVKE SEKWQRAEAR DVVHVKPMRA IFAPTYRRRT
WVMCALLTIA IIGLWAGAVY EPSAVIQLAT RAGMAKPEAT KMASMATGLL SIGTILGCLA
LPPLAERIGR KKTLAIYFGG MAVAIVGAFG WAFYLPNGLA PFIAWLFVLG FFGGNFALFS
LWLPELFETR VRATAFAFCT SFGRFVGAGV NFLLGAAVLS MHTLGVPVAL TAIAFVLGLL
VIPFAKETKG EVLPQ
|
|---|
| |