Gene Bphy_5082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5082 
Symbol 
ID6246576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2186090 
End bp2186803 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID642596812 
Productphosphoribosyl-dephospho-CoA transferase 
Protein accessionYP_001861215 
Protein GI186473873 
COG category 
COG ID 
TIGRFAM ID[TIGR03135] holo-ACP synthase, malonate decarboxylase-specific 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.147701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.175078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGG TTTGCGCCGC TGCGCCGTTC CCGGCCGCCG ATGCGCTCGC CGTCAGCGAT 
CCGCGCTGGC GGGCGCACGA CATTTTGCGA GTCCGCAAGC TCGAACCGTT CGACGCCGAA
CCGGCGTGGG TCCGAGACGC GTTCGCGCGC GCGCCGTTCG TCGTCGTGCG ACGGGCGCAG
GCTGCCGCCG GCTTCGTCGC AGTCGGCGTG CGCGGTGCGG CGCGCAACGA GCGGTACGGG
ACGTGGACGC GAAGCGACGA TATCGAGGCC GCTTTCACGC CCGAAGCGTT GTCGTCTGCT
TCTGCGCTGG CGGCCGATCG TGCCGCCTTA CCTGCCTTAC CCGCCTTCGT CGCGCTGGAC
GCGCTGCGTC GCGATACTTC ATGCTTCGCT TCATTCGCCT GGGGCCCGTC TGGAAGCGTC
GGCTTCGAAC TCGCAACAGG TGTGCCGACC GTGACGTCAA CCAGCGATCT CGATCTGTTG
ATACGGATGC CCAATCATCT GACTCACGAT GAAGCCGCTC GGATCCAGGC TGCACTGGAC
GGGCACGCTG CGCAAGCAGG CGTGCGCATC GACGCGCAAC TCGAAACGCC GGCGGGCGGT
GTGGCGCTCT CCGAATACGC ATCCCGCAAG GCAGCCGTGA TGGCGCGGCA TGCGAGCGGC
CCGCAGTTCG TCGCCGATCC CTGGGCGCGC GCTCCTGTGC AACCGGGTCC GTGA
 
Protein sequence
MMRVCAAAPF PAADALAVSD PRWRAHDILR VRKLEPFDAE PAWVRDAFAR APFVVVRRAQ 
AAAGFVAVGV RGAARNERYG TWTRSDDIEA AFTPEALSSA SALAADRAAL PALPAFVALD
ALRRDTSCFA SFAWGPSGSV GFELATGVPT VTSTSDLDLL IRMPNHLTHD EAARIQAALD
GHAAQAGVRI DAQLETPAGG VALSEYASRK AAVMARHASG PQFVADPWAR APVQPGP