| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5075 |
|---|
| Symbol | |
|---|
| ID | 6246569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2178296 |
|---|
| End bp | 2180476 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642596805 |
|---|
| Product | fusaric acid resistance protein region |
|---|
| Protein accession | YP_001861208 |
|---|
| Protein GI | 186473866 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0750969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.788772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC AGCATGCGAT CAAGCAAGTG TCTTCCGATG CCGTCGGATG GCATGCTGGC
GTTCCGCCGC GCGCGATTGT CGATGCCGCC ACGGAATGGA CGACGACAGA CGGCCTCGTC
TGGCTTCATC TTTTCAAGAC CGTGACGGCC GCGCTGCTTG CGCTGGGCAT CGCGATGCTG
CTCGAACTGC AGCAACCGCG CACAGCGATG ACGACCGTGT TCGTCCTGAT GCAGCCGTTC
AGCGGAATGG TGCTCGCGAA GAGCTTCTAT CGGATCGTCG GGACGTTTGT CGGCATGCTG
GCCGCGCTGT CGCTGGGCGC GCTGTTCGCG CAGCAACCCG AACTCTACAT GGTCGGCATC
ACCGTGTGGA TGGGCGTGTG CGTGGCGGCA GCGGTACGGT ATCGGCATTT TCGGTGGTAT
GGCTTCGTGC TGGCTGGCTA CACGGCGGCG CTGATCGGCA TTCCGACCGT GACGGAACCG
AATGGGCTGT TTCTGGCCGC GTTGACGCGT GCGGCCGAAG TGGCCATCGG CATCGTCTGT
TCGGCTGCCG TCAGCGCGCT GATCGTGCCG CGCCGCTCCA GCCTCGCGCT GCAAAATGCA
CTCCAATCGA GGCATCTGAA TTTTAGTGCC TTCGCCGTGA AAGTGCTGGA CGGAGCGGTC
GAGCGAGGTG CGTCGGAGCG GTATTTCGCG GACCTCGTCG ACGAAGTGGT CGGCTTCGAG
GCGACGCGCG CTTTCGCAGC GTTCGAGGAC CCCGGCATGC GCTCGCGTAG TCAGGTGCTG
GCAAGGTTGA ACCACGAGTT CATGGACGTC TGCGCGCGCC TGCATGCGCT GCATCAATTG
AGAAAGCGCT TGCGTGGCAA CGGATCGATT CAGGTCGAGC AAGCGACGGC GTCATACTTC
CGCGAGCTTT CGCAATTGCT CACCACGCAC AACGAGCGGC GCTTTGATTC ATCCGATGCC
GCTCGTGTTG CAATTGGACT CAAGACCTTC CAGTCGACGC TGCCAGCAAG AATGCGCGCG
ACGCGGCGTC CACTGGAATC GGGCGAGCCG CGATGCCTGC CCGATTTCGA CACGGCGGGC
GAGTTGCTGT ATCGCTTTGT CGTCGAGTTC ATCCGCTATA TCGACACTTA CGCGTCGCTG
GAGACCAATC ACAATCCGGC GCGCGAGCGG CCGGCCGTGC GTTACGTGAG CCGGACCAAT
GCTTTCGTGG TCGCGTGCAC GTTCGCGCGC ACGGCGGCCG TGGTCGGCGC TGTGAGCGCG
TTCTGGATCG CGACGAACTG GCCGAGCGGC GGCATGGCCG TGATCGGCGC GGCGCTCGCC
TGTGCGCTGA CGTCGGCGGC GCCAAACCCG GTCAAACTTG CGTTGCAGAT GACCGTTGGC
GCGGCGTGCG CGACGGTCGC CGGGTATCTG GTGACCTGCT ACGTGTATCC CGTCATCGAC
GGCTTTCCGC TGCTTTGCGC GATGCTCGTG CCCCTGCTCG CGGCGGGCAC CTGGTTTGCG
TCGCGAGCGA AGACCGCGGG CTACGGCGTG GGCTTCACGG TGTTTTTCTG TCTGCTTGCC
GCGCCCGACA ACGTCGTAGT CTACGCGCCC GCTCTGCTGA TCAACAACGG CATCGCGATC
GTTGTTTCCA TGCTCGCGAC GGCCGTCGGT GCAGCGATCG TGTTCCCCGT CCAGATGCCG
TGGCTGACTG CACGGATCGA AGGCGACCTG CGCAGCCAGA TCACGCTCGC ATGCACCGGG
CCATTGACGG GGCTCGCGCA GCGGTTCCAG TCGAGCACGC ACGATCTGAT GCACCAGTTG
CGCATGCTGT TGCCGAAGCG CTCGCGCCGT CACCGTCGGG CGCTCCGATG GATGCTGGTC
ACGCTCGAAG TGGGCCACGC GGTAATCGAC CTGCGCAGCG AAGCCGACCG CGCAACCTAC
GCACGGTATC TGCACGCCCG TTGGCAGCCG TCGCTCGACC GCGTCACGCG CGATCTCGCC
GAACTCTTCG AGCGGCCCGA CAAAGCCCAT GCGGACAAAG CGCAGATTTC GGTGCGCGCG
GCCATGCGCG TCGTGCAGCA GTCGCTGGAA GCCGTGCACA CGAATCGCGA CAGGCGGCAC
GATCAGCAAC GCATTCTCAG CTGCCTGCAT TTCATCCGCA CGGCGCTGCT CGACAAGGAC
GCACCGTTCG ACGCGCGCTA G
|
|---|
| Protein sequence | MKRQHAIKQV SSDAVGWHAG VPPRAIVDAA TEWTTTDGLV WLHLFKTVTA ALLALGIAML
LELQQPRTAM TTVFVLMQPF SGMVLAKSFY RIVGTFVGML AALSLGALFA QQPELYMVGI
TVWMGVCVAA AVRYRHFRWY GFVLAGYTAA LIGIPTVTEP NGLFLAALTR AAEVAIGIVC
SAAVSALIVP RRSSLALQNA LQSRHLNFSA FAVKVLDGAV ERGASERYFA DLVDEVVGFE
ATRAFAAFED PGMRSRSQVL ARLNHEFMDV CARLHALHQL RKRLRGNGSI QVEQATASYF
RELSQLLTTH NERRFDSSDA ARVAIGLKTF QSTLPARMRA TRRPLESGEP RCLPDFDTAG
ELLYRFVVEF IRYIDTYASL ETNHNPARER PAVRYVSRTN AFVVACTFAR TAAVVGAVSA
FWIATNWPSG GMAVIGAALA CALTSAAPNP VKLALQMTVG AACATVAGYL VTCYVYPVID
GFPLLCAMLV PLLAAGTWFA SRAKTAGYGV GFTVFFCLLA APDNVVVYAP ALLINNGIAI
VVSMLATAVG AAIVFPVQMP WLTARIEGDL RSQITLACTG PLTGLAQRFQ SSTHDLMHQL
RMLLPKRSRR HRRALRWMLV TLEVGHAVID LRSEADRATY ARYLHARWQP SLDRVTRDLA
ELFERPDKAH ADKAQISVRA AMRVVQQSLE AVHTNRDRRH DQQRILSCLH FIRTALLDKD
APFDAR
|
|---|
| |