Gene Bphy_5054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5054 
Symbol 
ID6246549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2150963 
End bp2152522 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content66% 
IMG OID642596781 
Productpeptidase S53 propeptide 
Protein accessionYP_001861188 
Protein GI186473846 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4934] Predicted protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.813199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC ATCCATTGCC CGGCAGCGAG CGTGTGCTCG CGCCGGGTTC GAAGGTGGTC 
GCGCAGTGCG ATCCGTCGGA AACGATCGAG GTCGTGGTCG TGCTGCGCCG CAAGAACGAG
CAGCAGTTCG CGCAGATGAT GAAGACAATC GAGGCGGGCG CGGCTGGCGC GAGGCCGCTC
ACGCGCGAAG AACTCGAACA GCGGTTCGGC GCGTTGCCGG AAGACATTGC GAAACTCAAA
GCTTTCGCCG CACAACATGG TTTGTCTGTG GTTCGGGAAG ACGCATCGGC GCGCACCGTC
GTACTGAGCG GCAGGATCGA GCAGTTTCAG CAGGCGTTCG ACGTTCAGCT GCAGCATTAT
GAGCATCAAT CGATGGGCCG CTTTCGCGGC CGTACGGGCG CGATCAGCGT GCCCGATGAG
CTACATGGCG TCGTCACGGC CGTGCTCGGG CTCGACGACC GGCCGCAGGC GCGGCCGCAT
TTCCGCATCC GTCCGCCGTT TCAGCCGGCC AGGGCGCAAT CCGCGTCGTC GTTCACGCCG
TTGCAACTGG CGTCGCTGTA TCGGTTCCCG CAGGGTGACG GCAGTGGCCA ATGCATCGGC
ATCGTCGAAT TGGGCGGCGG CTACCGCACG GCCGATCTCG ACAGCTATTT CTCGAGCTTG
GGTGTGGGTT CACCGAAGGT CGTCGCGGTC GGCGTCGACC AAAGCGGCAA TCAGCCTACC
GGCGACCCGA ACGGGCCCGA CGGCGAAGTG ACGCTCGACA TCGAGATTGC AGGCGCACTC
GCGCCCGCTG CAACGATCGC CGTGTACTTC ACGACCAACA GCGATGCCGG CTTCATCGAC
GCCGTCAGCC AGGCCGTGCA CGACAGGACC AACCAGCCGT CGGTGATTTC TATCAGCTGG
GGTGCGCCGG AAAGCATGTG GACCGCGCAG TCCATGAAGG CCTTGAACGA CGTACTGCAA
TCGGCCGCGG CAATCGGCGT CACGGTCTGC GCGGCATCGG GCGACAGCGG CTCGAGCGAC
GGCGTCGGCG ACGGGCGTGA CCATGTCGAC TTTCCCGCGT CGAGCCCCTA CGTGCTCGCG
TGCGGCGGCA CGAGTCTGCA AGGTTCCGGG CGAACCGTCG CGCATGAAGT GGTGTGGAAC
GACGGCTCGA ACGGCGGGGC GACAGGCGGC GGCGTGAGCG GCGCGTTCCC CGTGCCCGCA
TGGCAGGAAG GCCTGTCGAC ATCGGCTGCG CAGGGCGGCC AGCGCGCCTT GACGGGACGC
GGCGTGCCAG ACGTCGCCGG CGACGCGTCG CCCCTTACGG GCTACGACGT GATCGTCGAC
GGCAACAACA CGGTGATCGG CGGCACCAGC GCCGTGGCAC CGCTGTGGGC CGCGCTCATC
GCCCGCATCA ACGGCGCGAA AGGCGCTCCC GTCGGCTTCG TCAATCCGAA GCTGTACAAG
GCGAGTGCCT GCAACGACAT CACGCAGGGC AACAACGGCA GCTATGCGGC CACGACGGGT
TGGGATGCCT GCACTGGATT GGGCAGCCCC GATGGTGTGA AGGTGGCTGC GGCCTTATAG
 
Protein sequence
MTKHPLPGSE RVLAPGSKVV AQCDPSETIE VVVVLRRKNE QQFAQMMKTI EAGAAGARPL 
TREELEQRFG ALPEDIAKLK AFAAQHGLSV VREDASARTV VLSGRIEQFQ QAFDVQLQHY
EHQSMGRFRG RTGAISVPDE LHGVVTAVLG LDDRPQARPH FRIRPPFQPA RAQSASSFTP
LQLASLYRFP QGDGSGQCIG IVELGGGYRT ADLDSYFSSL GVGSPKVVAV GVDQSGNQPT
GDPNGPDGEV TLDIEIAGAL APAATIAVYF TTNSDAGFID AVSQAVHDRT NQPSVISISW
GAPESMWTAQ SMKALNDVLQ SAAAIGVTVC AASGDSGSSD GVGDGRDHVD FPASSPYVLA
CGGTSLQGSG RTVAHEVVWN DGSNGGATGG GVSGAFPVPA WQEGLSTSAA QGGQRALTGR
GVPDVAGDAS PLTGYDVIVD GNNTVIGGTS AVAPLWAALI ARINGAKGAP VGFVNPKLYK
ASACNDITQG NNGSYAATTG WDACTGLGSP DGVKVAAAL