Gene Bphy_5042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5042 
Symbol 
ID6246537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2141375 
End bp2142577 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content68% 
IMG OID642596769 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001861176 
Protein GI186473834 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.908293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.452822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTTG CCGTGCATAT CGGTTATCGG CTGATCGAGT CCGTTTCTTC AATTGCCGCC 
CGCTCTGCGT CCAGCGCGCC GCGGGCGGGC GCCTCGCAGG CCGCGCTGAA CGACGCACTG
CCCGATGCCG GCGACACGAC GGGCATCGGC CCCGCGCTGT CGATTCGTCC GCGTCTCGTC
GATCTCGGCA CGCCCGTTGC GCCCAGCCTG CGCACGGCCG TATGGCTGCC TGCCGCGACC
CTGTCCATGC CGATGAGCAC GCTCGCATTC GCAGACGGCG CGTCGCCCGA TATCTGGGAC
GACACACCCT TCGCGTTCGC GCACGACACG CGCTTCGCGC CGCTGATCCT GTCGCTGCCG
GCCGCGTTGA TCGCACTGTG TGCGTACTGG TTCTGCCAGA TGCGGCGCCA GTTGCGCACG
CTCGCGCAAA TAGCCCGTAA CGCCGACGCG GGCGGCATCG CATCGCGCGT GCCCGAGCGC
GGCGTGTGCG ACGTGCGGCT GCTCGCGCGC GCACTGAACG ATGTGATGGG CCGCCAGAGC
CAGGCGCTCG ACGAACAGTC GACGGCGCTT GCCGCGTTCT CACGGCAGAT CGACGTGCGC
CTCGACCTGT TGCGCGCGCG TGCGCTGAAC GTTGCGCAAT GGCACAAGCG CGTGGGGTTC
ATCGAGGACA TCGATCTGTT TTCGAACGTC GCGCGTCAGT TCGTCGCGAT GGCGGGGCGC
AGCGAGACCG ATGCCGCGCA GGTGTGCGTC GATGCATGGC TGCACGATCG CTTCGTGCAC
GGCGCCGCGC TCGACGACGC GAGGATCGTG CTGCGGCTGA ACGCGGGCGC TGATTTCACG
CTGCCGCGCC ATGCGCTGGA GCGGCTCGTC GGCAATCTGG TCGGCAACGC GCTGGCGCAC
GGCGCGCCGC CCGTTGAAAT CTGCACGACA CGCGGCGTGC GTACCTGGAT GCTGAGCGTG
CGCGATCACG GCAACGGTAT CAGCGAGCGC GACCTCGAAG CGGCGACGCA GCCCTTCGTG
CGGCTCGCAC CGAACGAGCC GCACGACGAC GGCCCCGTCG AACGCGGTGA ACATTGGGGA
CTCGGGCTGT CGATCGTCAG CCGGCTTGCG CGGCATTGCG GCGCAAAGCT CAGACTCGGC
AACCACTCCA ACGGCGGCCT GTGCGTACGC GTGATCGTGC CGATGCACAA GACCGTTCTA
TGA
 
Protein sequence
MLLAVHIGYR LIESVSSIAA RSASSAPRAG ASQAALNDAL PDAGDTTGIG PALSIRPRLV 
DLGTPVAPSL RTAVWLPAAT LSMPMSTLAF ADGASPDIWD DTPFAFAHDT RFAPLILSLP
AALIALCAYW FCQMRRQLRT LAQIARNADA GGIASRVPER GVCDVRLLAR ALNDVMGRQS
QALDEQSTAL AAFSRQIDVR LDLLRARALN VAQWHKRVGF IEDIDLFSNV ARQFVAMAGR
SETDAAQVCV DAWLHDRFVH GAALDDARIV LRLNAGADFT LPRHALERLV GNLVGNALAH
GAPPVEICTT RGVRTWMLSV RDHGNGISER DLEAATQPFV RLAPNEPHDD GPVERGEHWG
LGLSIVSRLA RHCGAKLRLG NHSNGGLCVR VIVPMHKTVL