| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4998 |
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| Symbol | |
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| ID | 6246495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2094343 |
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| End bp | 2095890 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642596727 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001861134 |
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| Protein GI | 186473792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.599541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.824643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC GCGAGTTCTC CCTACGCATG CCTGCGTTGG CAGCATCGCT TTGCCTTGCG
CTGAGCGGCT GTCTGGTGGG CCCCGATTTC GAACGACCAG CGAGTTCGAC ACCGGACGTC
TTCAATCGCA CGCAGTCCGC ACAGGCACCG AGCAAGGCCG TCGAAGCGGG CTTCAATCCG
GACTGGTGGG AACTGTTCAA CGATCCCACG CTGAATGCGC TCGAAAAGCA GCTCGCAGAT
GCCAATCTCG ACGTGGCGGC GGCGTCGGCC CGTCTGCGGC AAAGCCGCGC CGAGCAACGC
GTGGCGGGCG CGGCCGAATA CCCGACGCTG ACGGGCGCGG CGTCATATAA CCGCGAGCGC
GGCAGTGAGA ATGGCATCCT GTCGTTGCTC GGCGTCACGC CGACCAGCAC GCAGCCGCAA
TCGGCATCGG GCAGCGCGCC GCTCGGCGTG TCCGCGATGC CGGGTTCGAA GGGCTCGCCC
GCTTACGACC TGTATCAGTT CGGCTTCGAC GCTTCGTGGG AAATCGACAT CTGGGGCCGC
GTCCGGCGCA GTGTGGAAGC CGCGTCTGCG TTGACGGACG CGTCCTTCGA AGAGCGCAAC
GCCGTGCTGC TGTCCGCACG CGCCGAACTC GCACGCGATT ACATCCAGTT GCGCGACACA
CAGGCGCTGC TCCAGATCGC ACGGCAGAAC CTCGACATCG CACGCGACGC GACGCGCCTC
ACGCAAACGC GTGCGCATGA AGGCGTGACG ACCGATCTGG ATGTGGCCAA TGCGTCAGCG
CAGGCGGCCA ATATCGAAAG CCTGATCCCG ACACTCGAAT CGCGCAGGGC AACGACGATC
AATGCAATCG GCGTTCTGCT CGCGAAAGAA CCCGGTGCGT TGGGCGACAT GCTCGCGGAC
CCGGGCGATG TTCCCGCGCT GCCCGCCCAG GTGCCGATTG GCTTTCCATC TGAGCTGGTA
CAGCGGCGGC CCGACATCCG CAAGGCAGAA GCGCAGTTGC ACGCCGCGAC GGCGGCCATT
GGCATGGCGA AGGCCGACTT TTACCCGCGC ATCTCGCTCA ACGGGAGCGC CGGCTTCCAA
AGTCTTCAGC TTTCGAATCT CGCCGATTGG GCGTCCGGTC AGTTTGTTGT CGGTCCGTCC
ATCACCCTGC CGATCTTCGA AGGAGGACGC CTGAAGGGAA CGCTCCAGTT GCGCGAAGCG
CAGCAACAGG AAGCCGCGAT TGTCTACAAG CGCACCGTGC TTCAGGCATG GCGCGAAGTG
GACGATGCGT TGATCGTCTA CGACGCCGAA CAGCGTCGGC ACGAGCGACT GGAAGAGGTC
GTCAAGCTGA ACCTGCGCGC GCTGTCGATT GCACGTCAGC GATACAAGGC GGGCGCCGTC
GATTTCCTCG ACGTGCTCAA TGTGCAGAAA CAGTTGCTCG ATGCGCAGAG CAATCTCGAA
CAAAGCAAGG CCGACGCCGA TGCAAACCTC ATCACCTTAT GCAAGGTACT GGGCGGCGGA
TGGGAGTCGT ATTCCACTGG AGACACCGCG TTGACGCAGC GACGATAG
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| Protein sequence | MSVREFSLRM PALAASLCLA LSGCLVGPDF ERPASSTPDV FNRTQSAQAP SKAVEAGFNP
DWWELFNDPT LNALEKQLAD ANLDVAAASA RLRQSRAEQR VAGAAEYPTL TGAASYNRER
GSENGILSLL GVTPTSTQPQ SASGSAPLGV SAMPGSKGSP AYDLYQFGFD ASWEIDIWGR
VRRSVEAASA LTDASFEERN AVLLSARAEL ARDYIQLRDT QALLQIARQN LDIARDATRL
TQTRAHEGVT TDLDVANASA QAANIESLIP TLESRRATTI NAIGVLLAKE PGALGDMLAD
PGDVPALPAQ VPIGFPSELV QRRPDIRKAE AQLHAATAAI GMAKADFYPR ISLNGSAGFQ
SLQLSNLADW ASGQFVVGPS ITLPIFEGGR LKGTLQLREA QQQEAAIVYK RTVLQAWREV
DDALIVYDAE QRRHERLEEV VKLNLRALSI ARQRYKAGAV DFLDVLNVQK QLLDAQSNLE
QSKADADANL ITLCKVLGGG WESYSTGDTA LTQRR
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