| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4959 |
|---|
| Symbol | |
|---|
| ID | 6247104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2045741 |
|---|
| End bp | 2046847 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642596689 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_001861096 |
|---|
| Protein GI | 186473754 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.428493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGAG CGGACGGCTA TACAGAATCG ATGTTCACGA TGTCCAGGCT CGATGACTTC
GTTCCGGCCA ATCACCCGTT GCGACCGATT CGGCTGTGGT TGAACGAAGC GCTCACTCGC
ATGGATTCGG TCTTTTCGCG CATGTACGAG AGCGACGCGA AGGGCGGACG CCCAAGTATC
GCGCCGGAGA AGCTGATTCG CGCACTGCTG TTGCAAGTGC TGTATTCGAT TCGCAGCGAA
CGCATGCTGA TGGAGCAAAT CTCCTACAAC ATGCTGTTCC GCTGGTTCGT CGGATTGGCG
ATGGACGATG TTGTTTGGGA CCACTCCAGC TTCAGTAAGA ACCGCGACCG ACTGATGGCC
CATGATGTCA TGGTCAGTCT GTTCAATGAG ACGGTCGAGA CAGCACGCGT GCGTGGCCAC
CTGTCGGGCG AGCATTTCAG CGTCGACGGC ACACTCATTC AGGCTTGGGC CGGACACAAG
AGCTTTGTGC CGAAGGTGAA GTCGGATGAC GACTCGCCGC CTGACGGCGG TGCCGGCTCT
CACGAGAACT GGCATGGCGA GAAGCGTAGC AACGACACGC ATGAATCCAG CACGGACAGT
CAGGCCCGGC TGTTTCGCAA GAGTCGTGGC ACGGGCGCGA TGCTTTGCTA CATGGGGCAC
GTGCTGACTG ATAACCGACA CGGCCTCGTG GTGAACGCAC AGGTGACGCA GGCGAATGGC
ACAGCCGAGC GGGACACAGC AGCCGAAATG CTTGCGGACG CCGCGCAGTT TGCCGATACG
TCGATTACGG TAGGTGCAGA CAAGAACTAC GACACGGCCG GCTTCGTGGC GACGTGCCGC
GCACACGGCG TGACGCCACA TGTTGCGCAA AACAATGGCC GCGCGGGTGG CTCCGCCATC
GACGGACGCA CAACGCGCTG GGCCGGCTAT GCGGTCAGTC AGCGCAAGCG CAAATGCATT
GAGCAGGTCT TTGGCTGGAG CAAGACGGTT GGAAGAATTC GGCAGGCGAT GTTTCGGGGC
CTGCAACGAG TTGACCAGAT CTTCCTGTTG ACTCAGGCGG CCTACAACCT GACTCGCATG
CGCACGCTCG CCGCGAAAGC GGCATAG
|
|---|
| Protein sequence | MRGADGYTES MFTMSRLDDF VPANHPLRPI RLWLNEALTR MDSVFSRMYE SDAKGGRPSI
APEKLIRALL LQVLYSIRSE RMLMEQISYN MLFRWFVGLA MDDVVWDHSS FSKNRDRLMA
HDVMVSLFNE TVETARVRGH LSGEHFSVDG TLIQAWAGHK SFVPKVKSDD DSPPDGGAGS
HENWHGEKRS NDTHESSTDS QARLFRKSRG TGAMLCYMGH VLTDNRHGLV VNAQVTQANG
TAERDTAAEM LADAAQFADT SITVGADKNY DTAGFVATCR AHGVTPHVAQ NNGRAGGSAI
DGRTTRWAGY AVSQRKRKCI EQVFGWSKTV GRIRQAMFRG LQRVDQIFLL TQAAYNLTRM
RTLAAKAA
|
|---|
| |