| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4956 |
|---|
| Symbol | |
|---|
| ID | 6246455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2043855 |
|---|
| End bp | 2044880 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642596687 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001861094 |
|---|
| Protein GI | 186473752 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.440622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATTG TCACTATCGG AATCGATCTT GCCAAGAATG TATTCGCCGT TCACGGCGTG
AACGAGGCCG GCAAAGCGAT GCTGGTCAAG CCACGTGTTC CGCGCGATCA ACTGGCGATG
TTGATTGCGC AGTTGCCGCC GTGCGTCATC GGCATGGAGG CCTGCTCCGG TGCGCATCAC
TGGGCACGCC TGTTCCAGCA GCATGGCCAT ACGGTCAAGC TCATGGCGCC CAACCTTGTG
GCACCTTATC GCATGTCCGG CAGGCGCGGC AAGAACGACG CGGCGGATGC TGCTGCGATC
TGCGAAGCGG TGACGCGCCC AAGCATGCGT TTTGTGCCGC TGAAGGACGA ACATCAGCAG
GCAACGCTTT GCCTGCATCG GACACGACAA GGTTTCGTTG AAGAGCGGAC CGCGACCTAC
AACCGGTTGC GAGGCCTGCT CTCGGAATTC GGCGTGGTGC TGCCTCAGAG CCCGGAGAAG
CTGCGCAGAC ACATCACAGA ACATCTGGAC ACGTTGCCTG GCTGGGCGAA GCGCAGCATC
AGCGATCTGC TTGAGCATGC TGGCCATATC GAGGATCGCC TGCTCGAATA CGACCGTGCG
ATCGCTGAGA TCGCGCGTGA GGATGCGCGC AGCAAGAGAC TGATGCAGTT GCGCGGCATC
GGCCCAACCA CGGCCAGTGC GTTGCTCGCC AGTATCGGTG CTGGGCACGA CTTCAAAAAC
GGCCGGCAGG TGGCAGCCTG GATCGGACTC ACGCCCGGTC AATACAGCAG TGGCGGCAAG
GCCCGGCTGG GCAGCATCAC GAAGGCAGGT GACGCCTATC TGCGCGGCCT GCTGGTCAAC
GGTGCGCGCG CCGTTATTGC CAATCTCGGC GAGAAACAGG ATCGCTTCAG CCGCTGGGCT
CGAACCCTGA TCGAGCGACG GGGCTACTGG CGGGCGGCCA TCGCGATCGC CGCAAAGAAC
GCGAGGTTGG CGTGGGCCAT GCTGAAATAT GGCCATGACT TCAAGCTCGA ACCAGTTGCA
GACTGA
|
|---|
| Protein sequence | MPIVTIGIDL AKNVFAVHGV NEAGKAMLVK PRVPRDQLAM LIAQLPPCVI GMEACSGAHH
WARLFQQHGH TVKLMAPNLV APYRMSGRRG KNDAADAAAI CEAVTRPSMR FVPLKDEHQQ
ATLCLHRTRQ GFVEERTATY NRLRGLLSEF GVVLPQSPEK LRRHITEHLD TLPGWAKRSI
SDLLEHAGHI EDRLLEYDRA IAEIAREDAR SKRLMQLRGI GPTTASALLA SIGAGHDFKN
GRQVAAWIGL TPGQYSSGGK ARLGSITKAG DAYLRGLLVN GARAVIANLG EKQDRFSRWA
RTLIERRGYW RAAIAIAAKN ARLAWAMLKY GHDFKLEPVA D
|
|---|
| |