Gene Bphy_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4955 
Symbol 
ID6247103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2042676 
End bp2043521 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content59% 
IMG OID642596686 
Producttransposase IS4 family protein 
Protein accessionYP_001861093 
Protein GI186473751 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.219143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCA CTTTTTGTCG GACCTGGTAT CCTGGCGAGA TGAAAAAACG CAGGTCATAC 
CCAACGGATG TATCGGATGA AGAGTGGTAT TTCGCCGCTC CGTACCTGAC CTTGATGAAC
AAGGACGCAC CGCAGCGTCG CTACGAACTG CGCGAGATGT TCAATGCGCT GCGCTGGATC
GTACGCGCGG GTGCACCGTG GCGTTTGTTG CCCAACGACT TTCCACCTTG GGAACTGGTC
TACCAGCAGA CGCAACGCTG GATTCAGGCC GGCTGTTTCG AGGCCATGGT GAATGACCTG
CGTTCGATCA TCCGGATCGC GCAGGAGCGT CGTGGTCAAC CCAGCGCTGT CATTCTCGAC
GGACGGACCC TGCAATCGAC CTGCGAGAGT GGACCTCGCG CCGGTTACGA CGGCTACAAA
CGCAAACGCG GTAGCAAGGT CCACATGGCG GTCGATACCT TGGGGCAATT GATTGCTGTG
CATGTTACGC CGGCCAACGA ACAGGAGCGC GCGCAGGTCG GAGAACTGGC GCGTCTGGTT
CAGCAGGCCA CGGGCCAGAC GGTCAAGGTG GCGTTCGCCG ATCAGGGATA CACCGGCGAA
GATCCCGCGC AGGCGGCACT GGACGAAGGA ATCGAGCTTC AGGTAATCAA GCTGTCGGAG
GCGAAAAAGG GCTTCGTGCT GTTGCCGCGC CGCTGGGTGG TCGAGCGCAG CTTCGGATGG
CTCAACCGCT TCCGCCGACT GGCCAGAGAC TACGAGCGAT TGCCCGAAAC CCTGGCTGGT
TTGCACTTCG TCGTATTCTC CGTGCTTATG CTTGTCCACT TTGCAGCCCT TAACAAAAGT
GCCTAA
 
Protein sequence
MKGTFCRTWY PGEMKKRRSY PTDVSDEEWY FAAPYLTLMN KDAPQRRYEL REMFNALRWI 
VRAGAPWRLL PNDFPPWELV YQQTQRWIQA GCFEAMVNDL RSIIRIAQER RGQPSAVILD
GRTLQSTCES GPRAGYDGYK RKRGSKVHMA VDTLGQLIAV HVTPANEQER AQVGELARLV
QQATGQTVKV AFADQGYTGE DPAQAALDEG IELQVIKLSE AKKGFVLLPR RWVVERSFGW
LNRFRRLARD YERLPETLAG LHFVVFSVLM LVHFAALNKS A