Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4953 |
Symbol | |
ID | 6246453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2038592 |
End bp | 2039443 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642596685 |
Product | integrase catalytic region |
Protein accession | YP_001861092 |
Protein GI | 186473750 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGGATTG CCCCGTCGGG CTACCGACGC CATGCCGCGC AGCTTCGTGA TCCGTCGCGG CGCTCTGTTC GCGCAATCCG CGATGAACGT CTGCGGCCGG AGATCGAGCG CGTGTGGCGG GCCAACATGC AGGTCTACGG CGCCGATAAA GTCTGGAAGC AGATGAACCG GGAGCGTATC GCGGTGGCGC GCTGCACGGT CGAACGGTTG ATGAAGCAAC TGGGTTTGCG CGGCGTGATG CGAGGCAAGC GTGTTCGCAC GACTGTTCCT GATGCCATAG CCCCGCGCCC ACTGGATCGG GTCAATCGCC AGTTCAAGGC GGCACGGCCG AACCAGCTCT GGGTTTCGGA TTTCACCTAC GTTTCGACGT GGCAGGGCTG GCTGTACGTA GCCTTCGTGA TCGACGTGTT CGCTCGCCGT ATTGTCGGCT GGCGCGTCAG CACCTCGATG ACCACGGACT TCGTTCCGGA TGCACTTGAA CAGGCGCTTT ACGCGCGACG CCCGGGCGAC GACGGGACCT TGATACACCA TTCGGACAGA GGGTCCCAAT ACGTCAGCAT TCGCTATAGC GAACGGCTGG CCGAAGCGGG CATCGAACCG TCGGTCGGCA GCCGGGGCGA CAGCTATGAC AACGCCTTGG CTGAAACGAT CAACGGCTTG TACAAGGCTG AACTGATTCA TCGCCGCACC TGGAAAACGC GGGAATCCGT TGAACTGGCA ACGCTGGAGT GGGTGGCCTG GTTCAATCAT CATCGATTGA TGGAACCCCT CGGCTATATC CCGCCCGCCG AAGCTGAGGC AAACTACTAT CGGCAACTTG AAACAGCTGC CGCTGAACCC GTATTAACTT AA
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Protein sequence | MRIAPSGYRR HAAQLRDPSR RSVRAIRDER LRPEIERVWR ANMQVYGADK VWKQMNRERI AVARCTVERL MKQLGLRGVM RGKRVRTTVP DAIAPRPLDR VNRQFKAARP NQLWVSDFTY VSTWQGWLYV AFVIDVFARR IVGWRVSTSM TTDFVPDALE QALYARRPGD DGTLIHHSDR GSQYVSIRYS ERLAEAGIEP SVGSRGDSYD NALAETINGL YKAELIHRRT WKTRESVELA TLEWVAWFNH HRLMEPLGYI PPAEAEANYY RQLETAAAEP VLT
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