Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4940 |
Symbol | |
ID | 6246443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2023867 |
End bp | 2024634 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642596675 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001861082 |
Protein GI | 186473740 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCG CCAATCGGGT TTTTGTCATT ACTGGAGCGG GGTCGGGTCT CGGCGCCGCA GTAGCACGGA TGGTCGTGAA GCAGCAGGGT AAAGCAATGT TGCTGGACGT GAACGAAGAA GCGATTGTCG CTCTGGCGCG CGAACTAGGG GGCGCGGCGC GCTTCCGGAG GGCCGACGTG ACTAGCGAGG CGGATGGACA GGCCGCCATC GTGGCCACAG TCGACGCGTT CGGTCGCATT GACGGTCTTG CAAATTGCGC AGGCGTCGCG CCCGGCGAGA AGGTGGTCGG ACGCGAGGGG CCGCACAGTC TAACCAGCTT TGCTCGCGCG GTGTCGGTCA ATCTGGTGGG CACGTTCAAC ATGATCCGGC TGGCAGCCGA CGCCATGTCG AAGCAGCAAG CCGATGAACA AGGCGAGCGC GGCGTGATCG TCAACACTGC GTCTGTAGCC GCATTCGATG GACAGATAGG GCAGGCCGCG TATGCTGCCT CCAAAAGCGG TGTGGTCGGG TTGACTCTAC CGGTGGCACG CGAACTTGCG CGTTTTGGCA TCCGTGTGGT GACCATTGCG CCCGGTATCT TCGAGACACC GATGATGACG GGGATGCCGC CTGAAGTGCT GGATTCGCTC GGAAAAAGTG TGCCGTTTCC ATCACGTCTA GGGCGTCCGG ATGAATTCGC TGCGCTGGTG CGTCATATCG CCGAAAACAC AATGCTAAAC GGCGAGGTGA TTCGTCTCGA CGGCGCTCTG CGGATGGCGC CGCGTTAA
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Protein sequence | MDIANRVFVI TGAGSGLGAA VARMVVKQQG KAMLLDVNEE AIVALARELG GAARFRRADV TSEADGQAAI VATVDAFGRI DGLANCAGVA PGEKVVGREG PHSLTSFARA VSVNLVGTFN MIRLAADAMS KQQADEQGER GVIVNTASVA AFDGQIGQAA YAASKSGVVG LTLPVARELA RFGIRVVTIA PGIFETPMMT GMPPEVLDSL GKSVPFPSRL GRPDEFAALV RHIAENTMLN GEVIRLDGAL RMAPR
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