Gene Bphy_4932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4932 
Symbol 
ID6246437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2016998 
End bp2018227 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content50% 
IMG OID642596669 
Productextracellular ligand-binding receptor 
Protein accessionYP_001861076 
Protein GI186473734 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.350034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC ATACTCTCAA AAATTCTATT GCTATGGTCT TTGCTGTACT GGCATCAAGT 
TCCAACGCAC AGCAAGGCAA AATTTCAGAT GATGTTGTCA AGATCGGTGT CTTAACCGAT
ATGTCCGGAA GCTATTCGGA GTTTTCTGGG GCAGGTGCGG TTGCCGCGGT CAAGATGGCC
GTCGATGATT TTGGTGGAAA GGTATTGGGC AAACCTATCG AGGTCGTAGT TGCCGACCAC
CAGAATAAGA CTGATCTTGC TTCAACCAAG GCACGCGAGT GGTTCGACAC TCAAAAGGTC
GATGTAATTG TCGATTTGAC AAATTCTTCG ATCGCCCTCG CTGTCAGCCG GCTCGCCATG
GAAAAAAGCA AAATCGCGAT TGTGACTGGA GCGATGACCG AGCGACTGAC GAACGAGGAG
TGCTCTCCGA ATACGGTGCA CTACGTCGCA GACTCGTACG CTTTCGCCAA CGGTACAGGG
AAGGCGATGG TCGATCAGGG TGGAAACACC TGGTTTATCG TGGCGGCGGA TTATGCTTTC
GGAAACCTGA TGCTGGGCCG GCTTAGTACA ACGGTAACCA ATAGCGGCGG CAAGGTAGTC
GGATACATCA AGCATCCGCT AGCCGCATCA GATTTTTCTT CTTTCATTCT TCAGGCGCAA
TCTTCGGGCG CAAGAGTCAT CGGACTAGCC AACGCTGGCG TCGACACTGT CAACGCGATG
AAGTCGGCGC AAGAATTCGG GATCACTCGA GGCGGAAAGC AGAACATCGT CGGACTCGCC
ACTGTGATAA CCGATGTACA TGCCATGGGT CTTAATATCG CACAGGGACT CTTGCTGACC
ACTCCGTTCT ATTGGGACAT GAATGATGCT ACACGGCAAT TCTCAAAGCG ATACTTCAGC
AGAGTTAAAA AGATGCCCAA TATGGTACAA GCGGGTGATT ACTCTGCCGT TACTCACTAT
CTAAAAGCTG TCGAGGCCAC AGGAACCGAC GAGGCGGGTG CAGTAATGCA AAAAATGCGA
GAGATCCCGA TCAATGATTT TTTCGCAAAG AACGGAACCA TTCGGGAAGA TGGACGCATG
GTTCACGATA TGTATTTGAT GCAGGTCAAA ACTCCTGCAG AGTCGAAATA TCCGTGGGAT
TACTATAAGC TGGTTAAGCA ACTGCCAGCT TCGACCGTCA CGATCTCACC TGAAAAGAGC
GCATGCCGTC TCTTTAAACA AAAGTCTTAG
 
Protein sequence
MKKHTLKNSI AMVFAVLASS SNAQQGKISD DVVKIGVLTD MSGSYSEFSG AGAVAAVKMA 
VDDFGGKVLG KPIEVVVADH QNKTDLASTK AREWFDTQKV DVIVDLTNSS IALAVSRLAM
EKSKIAIVTG AMTERLTNEE CSPNTVHYVA DSYAFANGTG KAMVDQGGNT WFIVAADYAF
GNLMLGRLST TVTNSGGKVV GYIKHPLAAS DFSSFILQAQ SSGARVIGLA NAGVDTVNAM
KSAQEFGITR GGKQNIVGLA TVITDVHAMG LNIAQGLLLT TPFYWDMNDA TRQFSKRYFS
RVKKMPNMVQ AGDYSAVTHY LKAVEATGTD EAGAVMQKMR EIPINDFFAK NGTIREDGRM
VHDMYLMQVK TPAESKYPWD YYKLVKQLPA STVTISPEKS ACRLFKQKS