Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4932 |
Symbol | |
ID | 6246437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2016998 |
End bp | 2018227 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642596669 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001861076 |
Protein GI | 186473734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.350034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGC ATACTCTCAA AAATTCTATT GCTATGGTCT TTGCTGTACT GGCATCAAGT TCCAACGCAC AGCAAGGCAA AATTTCAGAT GATGTTGTCA AGATCGGTGT CTTAACCGAT ATGTCCGGAA GCTATTCGGA GTTTTCTGGG GCAGGTGCGG TTGCCGCGGT CAAGATGGCC GTCGATGATT TTGGTGGAAA GGTATTGGGC AAACCTATCG AGGTCGTAGT TGCCGACCAC CAGAATAAGA CTGATCTTGC TTCAACCAAG GCACGCGAGT GGTTCGACAC TCAAAAGGTC GATGTAATTG TCGATTTGAC AAATTCTTCG ATCGCCCTCG CTGTCAGCCG GCTCGCCATG GAAAAAAGCA AAATCGCGAT TGTGACTGGA GCGATGACCG AGCGACTGAC GAACGAGGAG TGCTCTCCGA ATACGGTGCA CTACGTCGCA GACTCGTACG CTTTCGCCAA CGGTACAGGG AAGGCGATGG TCGATCAGGG TGGAAACACC TGGTTTATCG TGGCGGCGGA TTATGCTTTC GGAAACCTGA TGCTGGGCCG GCTTAGTACA ACGGTAACCA ATAGCGGCGG CAAGGTAGTC GGATACATCA AGCATCCGCT AGCCGCATCA GATTTTTCTT CTTTCATTCT TCAGGCGCAA TCTTCGGGCG CAAGAGTCAT CGGACTAGCC AACGCTGGCG TCGACACTGT CAACGCGATG AAGTCGGCGC AAGAATTCGG GATCACTCGA GGCGGAAAGC AGAACATCGT CGGACTCGCC ACTGTGATAA CCGATGTACA TGCCATGGGT CTTAATATCG CACAGGGACT CTTGCTGACC ACTCCGTTCT ATTGGGACAT GAATGATGCT ACACGGCAAT TCTCAAAGCG ATACTTCAGC AGAGTTAAAA AGATGCCCAA TATGGTACAA GCGGGTGATT ACTCTGCCGT TACTCACTAT CTAAAAGCTG TCGAGGCCAC AGGAACCGAC GAGGCGGGTG CAGTAATGCA AAAAATGCGA GAGATCCCGA TCAATGATTT TTTCGCAAAG AACGGAACCA TTCGGGAAGA TGGACGCATG GTTCACGATA TGTATTTGAT GCAGGTCAAA ACTCCTGCAG AGTCGAAATA TCCGTGGGAT TACTATAAGC TGGTTAAGCA ACTGCCAGCT TCGACCGTCA CGATCTCACC TGAAAAGAGC GCATGCCGTC TCTTTAAACA AAAGTCTTAG
|
Protein sequence | MKKHTLKNSI AMVFAVLASS SNAQQGKISD DVVKIGVLTD MSGSYSEFSG AGAVAAVKMA VDDFGGKVLG KPIEVVVADH QNKTDLASTK AREWFDTQKV DVIVDLTNSS IALAVSRLAM EKSKIAIVTG AMTERLTNEE CSPNTVHYVA DSYAFANGTG KAMVDQGGNT WFIVAADYAF GNLMLGRLST TVTNSGGKVV GYIKHPLAAS DFSSFILQAQ SSGARVIGLA NAGVDTVNAM KSAQEFGITR GGKQNIVGLA TVITDVHAMG LNIAQGLLLT TPFYWDMNDA TRQFSKRYFS RVKKMPNMVQ AGDYSAVTHY LKAVEATGTD EAGAVMQKMR EIPINDFFAK NGTIREDGRM VHDMYLMQVK TPAESKYPWD YYKLVKQLPA STVTISPEKS ACRLFKQKS
|
| |