| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4899 |
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| Symbol | |
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| ID | 6246409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1978534 |
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| End bp | 1979793 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642596641 |
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| Product | integrase family protein |
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| Protein accession | YP_001861048 |
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| Protein GI | 186473706 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0830268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCA GCAAATTGGC GGCGCACTCA TCGCGCTGTA GCATAACTAT CGGGAGCCCC
GTAGACGCCA TCGTTTCCAA ATACGTTGAT CACCTGCGTG CCCTGCGATA TGCGGACGAT
ACGATTCAAC ACTATCTTGC CTCCTTGCGT CACTTTACGC ATCGGCTGAA CAAGCGATTG
ACCCTTGCCG ATATCGATAA TGCTCTCGTG ACGGAGTTTG TCGATCTTCA TTTGCCGCAT
TGCAGATGTC CGCGACCTTG TATGCGCCAT GTCAACACGG TACGTGCTGC TCTCCGCCAT
CTTCTGGCCG TTCTAAAGCA GGAGGGGTTG TGCAACGTCG GTCGCCCTCA GTTGCATACG
CCGGTCGACG TCGAACTGGA GCTGTTCAGG CATTACTTGG TCGATAGTTG CGGTTACGCG
CAGACCACTT GTCGTAACCG TCTTTGGCAT ATTCGCAACT TCCTCGACTC TGTCGTCGGT
CAGGAGCCGG TAACTGCCGA TCGGCTAACT TCAACGGATA TCGAGAACTT CACCGCGCGC
TGTTTTAAAG GGCGGTGTCA CGCGACACGT CGTAGCTACT GTGTTGATCT CGCAAGTTAT
CTGCGCTTTC GAGGCTTGCA CGGAGATGAC ACTCGCGCTC TCCTCGCCGC GATCCCGAAG
ATGGCGCCGC CGATACCAGC GCGTCTGCCG ATTGCGATGA CGGACAGGGA GCTGGATCTC
TTTTTCGCAG CGTTCGATTT GACCAAACCG ATTGGCATGC GCGATTTCGC AATTGCACGG
TGTCTGTCCG ATTTGGCGCT ACGCCGCATG GAAGTCGCGC GTCTGCAGTT GGGATCGTTC
GATTGGCCGA ATGGAACGGT AACGCTAACT CATAACAAGG GCGGACGAGA ACGCAAGCTA
CCGCTGCCGG TACAAACGGC GCACGCACTT GTCCGCTATC TACAGCACGG ACGGCCCGAT
ACGAGTAATC GTGCCGTCTT TGTCCGGCAA ATCGCACCGT ACGACAAGCC GATCAGCGCG
GTTGCCATCA ATCACCTCGT CAGAGCCGCC TTTGTACGCG CGGGCCTCGG CGAGCGATTT
CGTGGAGTCC ACGTGTTGCG ACGCACGGCA GCAACCCGTC TCATTCGAGG TGGCGCATCG
CTAAAAGAAG TTGCCGACGT ACTGGGGCAT AGGCATCTCA ACACGACGAC CATTTACACC
GGGGTTGATC TTGATCGTCT GCGCAAGGTA GCCCAACCAT GGCCGGAGCG TCAGTCATGA
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| Protein sequence | MTVSKLAAHS SRCSITIGSP VDAIVSKYVD HLRALRYADD TIQHYLASLR HFTHRLNKRL
TLADIDNALV TEFVDLHLPH CRCPRPCMRH VNTVRAALRH LLAVLKQEGL CNVGRPQLHT
PVDVELELFR HYLVDSCGYA QTTCRNRLWH IRNFLDSVVG QEPVTADRLT STDIENFTAR
CFKGRCHATR RSYCVDLASY LRFRGLHGDD TRALLAAIPK MAPPIPARLP IAMTDRELDL
FFAAFDLTKP IGMRDFAIAR CLSDLALRRM EVARLQLGSF DWPNGTVTLT HNKGGRERKL
PLPVQTAHAL VRYLQHGRPD TSNRAVFVRQ IAPYDKPISA VAINHLVRAA FVRAGLGERF
RGVHVLRRTA ATRLIRGGAS LKEVADVLGH RHLNTTTIYT GVDLDRLRKV AQPWPERQS
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