| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4873 |
|---|
| Symbol | |
|---|
| ID | 6246385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1950558 |
|---|
| End bp | 1952063 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642596617 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001861024 |
|---|
| Protein GI | 186473682 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.103797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.996153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTT CTGGGAAGCG TGGTACCGCC AAACGTGCGG GTTACCAGTC CGACTTGGAA
GTTGTCGTTG TGACCGCCTT AAAGCCTCTC TCTCGCAGTC GTCAGTCAAG CGCCAAATGG
GATCTCGAGA TCCAAAGGAT TTCGCCCATC GCGGCTATGC CTACAAAAGT TCCACAAGAA
GAAGGATCTG AGATGACAGC CACACGCGAG CCCCAAGCCT TGGGGGAACG AAACGAAGAA
GCAAATGTTG TTCGCAAAAC ATGGAGCGTC GGGCGCCTAC GGTGGGCCAT GCTTGCGCTA
GTGTTCGCGG CTACGGCACT GAACTACATC GATCGCGCAG CTCTTGGCAT CCTCCAGCCG
ATCCTCAGTG TGTCGCTTGG CTGGACCACA ATGGACTACG CAAACATCAA TTTCTGGTTC
CAGGCCGGAT ATGCCGTGGG CTACTTCCTT CAAGGTTCAT TGATCGATCG ACTCGGGGTT
CGGCGAGTCT TTTTCTGGGC TGTCTTGTTG TGGAGTCTCG CCACAGGGGC GCATGCTTTC
ACCACCTCTG TCGCAGGATT CATGCTTTGC CGCTTGATCT TGGGACTGAC TGAAGGAGCA
AACTACCCTT CGGGAGTCAA GATCTCAAGA TTATGGTTTC CTCCGGCGGA GCGGGCCATT
GCGACTGGAA TTTTTAACGG TGGAACACAT ATCGGTGCAA TCCTCACACC CATTATCCTG
CCGGCTCTAC TCTTCGCATT CGGCTGGCAA GCCGTCTTTA TTGGCGTCGC GATTCTCGGA
CTCGCGTGGG CCCTTGTTTG GGCACGTTGC TACTACGACC CCAAGGACCA TCCTTGGATC
AGCGCATCGG AACGCGAGTA TGTGAAATCT GATGATGAGA AACCGGCCAT CAAAGTGCCT
CTGCATAGAA TCTTGGTTAT GCGAGGGACT TGGGCCTTTG CGCTCGCGTT CTCATTAACA
GCACCTGTCT TCTGGTTCTA CCTTTACTGG CTACCACCAT ATCTCCACCA GCAGTATTCT
CTCGGCATCA GCGTCAATCA GATCGGGTTA CCATTGATCA TCATCTATGT AGCCGCGGAC
GTTGGAAGCA TTGGAGGAGG ATTGATCTCT TCCTTCCTCA TTACCCGTGG CGTACGCCCT
GTGTACGCCC GACTCATCAC AATGTTCCTA GCAGCCGTGC TCGTTACGAG TGTTGTGGCG
GCAAACTCGA ATAATCTTTG GACTGCCGTT CTGGCAATCG CGCTCGGCCT CGCCGCTGGA
CAAGCCTGGA TCACGAATAT CTATAACATC TGCATGGATT ACACGCCCAA AGAGCTCGTA
AGCACAGTTT TTGGCTTTGG CGGTATGTGC GCAGCAGGAA CAGGCATGTT CATGACACAG
GTCGTCGGCT ACGTTCTCAC GACCACACAT AACAATTACA AAATTCTTTT CATGGGCATT
CCAGGACTCT ATGCAATAGC GTTGATCTGG CTGCTCCTCT TGGCGCCCAA AACATCGGCC
GAATAA
|
|---|
| Protein sequence | MHRSGKRGTA KRAGYQSDLE VVVVTALKPL SRSRQSSAKW DLEIQRISPI AAMPTKVPQE
EGSEMTATRE PQALGERNEE ANVVRKTWSV GRLRWAMLAL VFAATALNYI DRAALGILQP
ILSVSLGWTT MDYANINFWF QAGYAVGYFL QGSLIDRLGV RRVFFWAVLL WSLATGAHAF
TTSVAGFMLC RLILGLTEGA NYPSGVKISR LWFPPAERAI ATGIFNGGTH IGAILTPIIL
PALLFAFGWQ AVFIGVAILG LAWALVWARC YYDPKDHPWI SASEREYVKS DDEKPAIKVP
LHRILVMRGT WAFALAFSLT APVFWFYLYW LPPYLHQQYS LGISVNQIGL PLIIIYVAAD
VGSIGGGLIS SFLITRGVRP VYARLITMFL AAVLVTSVVA ANSNNLWTAV LAIALGLAAG
QAWITNIYNI CMDYTPKELV STVFGFGGMC AAGTGMFMTQ VVGYVLTTTH NNYKILFMGI
PGLYAIALIW LLLLAPKTSA E
|
|---|
| |