| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4872 |
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| Symbol | |
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| ID | 6246384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1949241 |
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| End bp | 1950401 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642596616 |
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| Product | porin |
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| Protein accession | YP_001861023 |
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| Protein GI | 186473681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0644122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.66467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGA AAATCTTATC TTGTTTGGCA ATTTCACTTG CAGCGCTACA GTCAACTGAT
TCTGACGCAC AGAGCTCCGT CACGCTCTAT GGTCTCGCCG ATAACGGTAT CGATTTCGTC
AATAACTCAG CCGGCAAGCA ATTGCTCGCC ATGCGCGACG GAACGTCCAC TGGTATATAT
GGGAGTAGGT GGGGCCTCAT TGGGCATGAA GACCTTGGGG GCGGTCTGGA AACCATCTTC
CGCCTCGAGA GCGGGTTTAA TCTTCCTAGC GGCACCGCAG CTCAGGGTGG GCGCGAGTTT
GGTCGCCAAG CGTACATCGG CTTGGCATCT TCCCGTCTGG GTACAGTAAC GTTCGGTCGG
CAGTATGACT CGGTAGTCGA CTTCATGCAG TTTGCATCGA CTACTTCTGA ACTGGGTACG
TTCGCCGCAC ACGGAACCGA TGTCGACAAT CTAGTCAATT CCTTCCGGAT CGACAACGCA
GTGAAATATA CGAGTCCAAC AGTTTCCGGC TTCCGCCTTG GCGTATTGAT GAATTTCAGC
GGTACCAACG CCGCGAACTC ACCGCACACG ATACCGATCT GGAGCGTTGG AGCCGACTAT
TCAGTTGCTG GAGCGCACGT TGCAGCGTCC TATCTCTATG CAAACAGACC GGCCCAAGTT
TTCACGACGG GCGATGGACA CTTCATCGCA AACACGACCG GAGCGGCTAT CGGTGCGAGC
GGACCATGGA GCTACATTGG AAATCCGGAC CACATGAGCA TAATTGCTGC CGGCGGGACA
TACAATTTCG GAAATATTAC CCTCGGAGGA ATTTATACCC GCTCTCTCTT CGCGCAGGCA
AACGGTACCT CGAGTGACGT CTCGTTTGAC AACTATGACG TTTCGGTGCG GTATCAGCTG
AATCCCGCGT GGCGATTCAT CGGGGGATAT CTCTTTACGG TTGGACATAT CGAATACCTG
GGACAAACGC TGAAATATCA TCGATTTATC TTGGGGTCTC GCTACGCGCT GTCCAAGCGT
ACCGAGGTCT ACGGCTTGGT TTCCTTCCAA CAGGCAGCCG GAGACGCACA CTATGCCGAC
CTTTACCAAG GCGCCCTTGC GTCCATGTCG ACAACAAATC GCCAAATAGG CGGCCGGATC
GGTATCGTGC ACCGTTTCTA G
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| Protein sequence | MNKKILSCLA ISLAALQSTD SDAQSSVTLY GLADNGIDFV NNSAGKQLLA MRDGTSTGIY
GSRWGLIGHE DLGGGLETIF RLESGFNLPS GTAAQGGREF GRQAYIGLAS SRLGTVTFGR
QYDSVVDFMQ FASTTSELGT FAAHGTDVDN LVNSFRIDNA VKYTSPTVSG FRLGVLMNFS
GTNAANSPHT IPIWSVGADY SVAGAHVAAS YLYANRPAQV FTTGDGHFIA NTTGAAIGAS
GPWSYIGNPD HMSIIAAGGT YNFGNITLGG IYTRSLFAQA NGTSSDVSFD NYDVSVRYQL
NPAWRFIGGY LFTVGHIEYL GQTLKYHRFI LGSRYALSKR TEVYGLVSFQ QAAGDAHYAD
LYQGALASMS TTNRQIGGRI GIVHRF
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