| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4870 |
|---|
| Symbol | |
|---|
| ID | 6246382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1945663 |
|---|
| End bp | 1947033 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642596614 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001861021 |
|---|
| Protein GI | 186473679 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.49898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA TCGCGTTGGT CGTATCGGTG GTGTCTTCGG CCAGCGCATG GCCGGTGACG
CCTGCTGACG TTGCGAAGCT GGGTAAGGAA CTCACAGCTG CAGGAGCCGA AAAGGATGGG
AGCAAGGACG GTCAGATTCC TGCATTTGGA GGCGAATCCA AGCCTACGGG CAGTTGGACG
TTCGGTAAGT CCAGAGAGGA TTTCTGGAAA TATAAAGACG AGAAGCCGCT CTACGTAATC
GATGCTTCGA ATGTCGACAA GTATGCTGAC AAGCTGACGC CCGGCCAAAT TGAGATGATC
AAGCAGGTCA AAGGCTACAC GATGCCCGTG TATCCGTCGC ACCGGGAATG TGGCATTCCA
CAAAACGTCG CCGATAACAC GAAGGAAGGT GCACTCAAGT CCACTATCGC GTCGGATGGT
TGGTCGCTGG ATAACGCTGT GTTGCCCAGC GTGCCATTCC CGGTTCCGGA CAGTGGTATC
CAAGCAATGT GGAACTTCTT GGCACGGTAT CAGGGTCTAG GAACGGTCTA CCAAGACATC
TTTACGTACC TTTCGCCACG TCCCGGCTCG GATCAGTCGA TCGCTTACCA TTCGGCCGCG
ATTGCGTACT ACCCATGGGG AGCCAAAGGT ACGCATAATC CGAAAGAAAA CGGCGGCCTC
CAGCAGGGGA GTTACTACGC TTACAGTGAA CCTGCCGCGT TGGCGGGTCA GGGGACAACG
CAGCGTTACT ATTTCTCAAA GGACACTGAC AGCTTCTACT ACTTTACCGG ACAGCGGCGA
GTCCGTCGTC TGCCTTCGTA TGCTTACGAT GCACCGATGA TTGGGTACGA GAATCAGTAC
ACAATTGATT CGCCTGGCAT TTTCGGCGGA AACCCTGATC GGTTTGATTG GAAGCTCGTC
GGGAAGAAGG AGGTCTATAT TCCCTACAAC GTGTTCGCTA TGCAGCGACT GAATGCGAAG
ATCAGCGACG TTACGGGGCC GCATTTTGTC AATCCGGCAT TCCGTCGCTA TGAGTTGCAT
CGAGTATGGG AAGTCGTCGG CACAGTGAAG TCCGGGGTGC GCCACTCCAC CCCCAAGAAA
GTCATCTACC TCGACGAGGA TAGCTGGATC GCAGCGGTTG GTGACGACTA CGATGCTCAA
GGAAAGATCT GGCACGTGAA GGAAAACGAC ATCACGCCCC AGTGGGAAAT TGGTGCCTGT
ATTCTGAACG GATATGTCCA GAATGATGTA ATCAGTGGTC GATATATTCT CGATATGGCG
GTTGTAGGAA CGGGTAAAGA TATCAAGAAT GTGCCGCCTG ACGGAAATGA TCCCCACCTG
AAGGATAGCT TTTTCACCAG CGAAGGTCTT CAGGCTGTCA GTTCTCAATG A
|
|---|
| Protein sequence | MKVIALVVSV VSSASAWPVT PADVAKLGKE LTAAGAEKDG SKDGQIPAFG GESKPTGSWT
FGKSREDFWK YKDEKPLYVI DASNVDKYAD KLTPGQIEMI KQVKGYTMPV YPSHRECGIP
QNVADNTKEG ALKSTIASDG WSLDNAVLPS VPFPVPDSGI QAMWNFLARY QGLGTVYQDI
FTYLSPRPGS DQSIAYHSAA IAYYPWGAKG THNPKENGGL QQGSYYAYSE PAALAGQGTT
QRYYFSKDTD SFYYFTGQRR VRRLPSYAYD APMIGYENQY TIDSPGIFGG NPDRFDWKLV
GKKEVYIPYN VFAMQRLNAK ISDVTGPHFV NPAFRRYELH RVWEVVGTVK SGVRHSTPKK
VIYLDEDSWI AAVGDDYDAQ GKIWHVKEND ITPQWEIGAC ILNGYVQNDV ISGRYILDMA
VVGTGKDIKN VPPDGNDPHL KDSFFTSEGL QAVSSQ
|
|---|
| |