| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4867 |
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| Symbol | |
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| ID | 6246379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1940412 |
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| End bp | 1942094 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642596611 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001861018 |
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| Protein GI | 186473676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.348286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATT CTGGAATCCC TGAATTGGTT TTCGACTACA TCGTTGTTGG TGCCGGTTCT
AGCGGTTGTG TGGTCGCATC ACGATTGTCC GAGGATCGGA GTGTGAGCGT CTTGCTCATT
GAGGCGGGAC CCGAAGACAA GAGTTGGACT ATCGACATGC CGCTTGCCGT GGAGGCGTTG
GTTTCCGGCA GCCGCTTCAA CTGGCAATAC CGGAGCGAAC CGGAAACCAT GCTCGAGGGC
CGGCAGATCG ACCATCCGAG GGGTAAAGTT CTCGGCGGGT CGTCGTCGAT CAATGGGATG
GTATATACAC GCGGTAACCC GTTGGACTAC GACGGCTGGG CCATCGAGTT CGGATGTACC
GGCTGGGGTT ACGCCGACGT TTTGCCCTAC TTCAAACGTT CAGAAACATT TCTGGGGCCT
TCAAACGAAT ATCGTGGTCG AACGGGGCCT CTAAAGGTGA CCCGACCAGA TGTCAACAAG
GATCCGCTAA ATCGGGCCTT TATGGAGGCG GGGAGGCAGG CTGGTTATCC GGTTAGTGTT
GATTCGAACG GTTTCCAGCA CGAAGGATTT CATCCGAGCG AATGCACGAT CTATAACGGT
CGCAGGTGGA GCGCCTCTCG GGCATTTCTC TCGCCAGATG TGCGTCGACG TTCCAATCTC
GCGATCTACA CAGGCGCATT GGTTGAGCGC ATTGTAATTG AGAATAAGGT AGCGGTCGGC
ATCGAGCTTT CGCGAGCCGG TACTCGCACG TTTGCCAAGG CGCGGAGAGA GGTCGTTCTG
TGCGCCGGTG CGTTTGGTTC GCCTCAACTG CTCCAGTTAT CGGGGATTGG TCCCAGCGAT
GTTCTTCAAG CAGCGAATGT TGACGTCGTG CACGAACTGA ACGGCGTCGG CAAAAATCTG
CAGGATCATC CCGATCTTCC GGTGCCATTC GTTTGCGAGA AACCAGTCGG TCTTGGTGCG
GTTACACGTT TTCCACGGAA GCAAATCGTT GGCGCACAGT GGTTTCTTGG AAAAGGCGGT
CTTGCCGCCA GTAACCAGTT CGAAGCTGCG GCCTATCTCC GCACCAAGGC GGGTATCAAA
TATCCTGACC TGAAACTTGA ATTGTTGGGC GTTGGTTTTC AGCCGGATAG CTTTAAACCT
TACCCTGGAT ACAGTTTTCA GATCCATATG ACGCTGCTCC GGGCAGCCAG CCGCGGGCAC
CTCGCGATCA AGAGCAACTC GGCAGCGGAG AAGCCTCTAA TCAAATTTAA CTACCTCAGC
GAGTCGGCTG ACAGAGAGTT CTATCGCGAC GCATTTCGAA TCACGCGTGA GCTCGTCGCA
CAACCAGCAT TTTCGGAATA TTCGGGGAAG GAATTGGCGC CGGGTGCGGA AGTGAAGTCC
GATGACGAGA TCGATCATTG GGTGGCCGCG CACATTGCAA CTGCTTTCCA TCCGTCGGGG
ACATGCAGAA TGGGACCCGT GAACGACGAG CGGACCGTTG TCACTCCGGA TCTAAAGGTT
CGCGGAGTTG CAAACCTGCG GGTGGCCGAT GCCTCGATTA TGCCGTTGGT AGTTGCTTCG
AACACGAACG CCCCATGCAT CATGATTGGC GAGCGCGCGG CTGATCTGTT GCGTGGAAGG
AAACTCTCGC CGGAGGAACG TCCATACTAT GTTGCCCCGA ACTGGGAAAC CTCCCAACGG
TAG
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| Protein sequence | MKDSGIPELV FDYIVVGAGS SGCVVASRLS EDRSVSVLLI EAGPEDKSWT IDMPLAVEAL
VSGSRFNWQY RSEPETMLEG RQIDHPRGKV LGGSSSINGM VYTRGNPLDY DGWAIEFGCT
GWGYADVLPY FKRSETFLGP SNEYRGRTGP LKVTRPDVNK DPLNRAFMEA GRQAGYPVSV
DSNGFQHEGF HPSECTIYNG RRWSASRAFL SPDVRRRSNL AIYTGALVER IVIENKVAVG
IELSRAGTRT FAKARREVVL CAGAFGSPQL LQLSGIGPSD VLQAANVDVV HELNGVGKNL
QDHPDLPVPF VCEKPVGLGA VTRFPRKQIV GAQWFLGKGG LAASNQFEAA AYLRTKAGIK
YPDLKLELLG VGFQPDSFKP YPGYSFQIHM TLLRAASRGH LAIKSNSAAE KPLIKFNYLS
ESADREFYRD AFRITRELVA QPAFSEYSGK ELAPGAEVKS DDEIDHWVAA HIATAFHPSG
TCRMGPVNDE RTVVTPDLKV RGVANLRVAD ASIMPLVVAS NTNAPCIMIG ERAADLLRGR
KLSPEERPYY VAPNWETSQR
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