| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4838 |
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| Symbol | |
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| ID | 6246351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1903076 |
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| End bp | 1904233 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642596583 |
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| Product | porin |
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| Protein accession | YP_001860990 |
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| Protein GI | 186473648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000248162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGACG CGATACCAGT CATGAAACAG AGCAAGATAG GCATTGCAGT GGCATTGATC
TGTCTGTCGG CTCGCACCCA CGCGCAAGGA AGCGCAACGC TCTTTGGAGC GATAGATGAG
GGTTTGAATC TATCAAACAA TACCGGCGGA TCGCAATCGT TGCAGATGGC GAGTGGCTAT
CTTGCCTCGA GTCGCTGGGG ACTCAAGGGC GATGAAGGAA TCCATGGAGG ATTGCATGCC
CTGTTTGACC TTGAAAGTGG CTTTCTGCCG GAAAACGGGA ATCTCTTATA TACGGGGCGA
CTGTTCGGCT TCCAATCGAC GATTGGTGTT GAGTCGGACA TCTTGGGGAC ATTGACGATC
GGGCGACAGT TTGATGCCGT AACAGATACA GTTGGTCCGC TTACAGCAAA TGGCAGTTGG
GCAGGATTTC TGTTTTCACA TCCCCTCGAC AACGACAATA CCGACGGAAG TTTTCACGCA
AACAATTCGA TCAAGTACAC CTCGCATACC TACGCTGGAT CCTCCGTTAC GGCAATGTAC
GGATTCAGTA ATCTCGCGGG GGGATTCGGC ACCAACAGGA TCTACGCGGT TGGTCTGAGT
GAGACCTACG GCGACCTGAA GATGGCAGCT GTCTATGAGC AGTTGTCTGC CGCAGGGGCG
ACTTCGTCGG GTTCGGTATC AGCGGGTGAC CAGGGCTTCA CGGCCAGCAA GCAGAAGATC
TGGGGTGTAG CGGCTGGATA CGAAACAGGG AAAGCTACAT TAAATTTGGT CTACACCCAC
ACGAACATTT GCCAAGCGAC GGAATCGATC TACGTTGGAG CCCTGAGTGG GAATCCAGAT
TTAAGGTTCG ACAACATCGA GGCAAACTTC AAGTACAACA TCGCTCCAGA CCTGTTATTG
GGGTTTATGT ACACATATAC ACTCGCGCGC ATCTCCAACG CCAAAACAGA TTCATCATTG
CACTGGAATC AGATAGGGGC GATGGCACAG TATCGGCTCT CCGTTCGCAC CTCTGTGTAT
GGGCAGGTTG TCTACCAGCG CATATCCGCC AACAGTGTTG ACAATATCCT TGATACCGCG
TTGATCACAG GGGCTCTCGG CGCGTCTTCA AATCATCACC AGGCTATCGG GCGAATCGGC
ATCCTGCACC TTTTTTAA
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| Protein sequence | MEDAIPVMKQ SKIGIAVALI CLSARTHAQG SATLFGAIDE GLNLSNNTGG SQSLQMASGY
LASSRWGLKG DEGIHGGLHA LFDLESGFLP ENGNLLYTGR LFGFQSTIGV ESDILGTLTI
GRQFDAVTDT VGPLTANGSW AGFLFSHPLD NDNTDGSFHA NNSIKYTSHT YAGSSVTAMY
GFSNLAGGFG TNRIYAVGLS ETYGDLKMAA VYEQLSAAGA TSSGSVSAGD QGFTASKQKI
WGVAAGYETG KATLNLVYTH TNICQATESI YVGALSGNPD LRFDNIEANF KYNIAPDLLL
GFMYTYTLAR ISNAKTDSSL HWNQIGAMAQ YRLSVRTSVY GQVVYQRISA NSVDNILDTA
LITGALGASS NHHQAIGRIG ILHLF
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