| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4793 |
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| Symbol | |
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| ID | 6246308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1858473 |
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| End bp | 1861097 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642596540 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001860947 |
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| Protein GI | 186473605 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.153175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.530231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGA CGGGCTCGCG CGTTGTGAGC GATCAGAACC TCGAACTGAA AGACGGTCCC
GACGCACCGC GCGGCACGCT CGATGCGTTG GCGCAAACCT GGCGCGATCC GCCCGGACTG
ATCGGCGTGC TGTCGGCCGT CAATCACAAG ACCATTGCAC GCCGCTTCAT CGTGACGACG
TTCGTGTTTT TTCTGCTGGC GGGATTGCTC GCACTCGCGA TGCGCGTCCA GCTCGCGCGC
CCCGACAATC GGCTGATTTC GCCCGATCTC TATGACCAGC TGTTCACGAC GCACGGCTCG
GCCATGATGT TCCTGTTCGC CGTGCCTGTG ATGCAAGCCG TCGCTGCGTG GCTCGTACCG
CTCATGGTCG GCGCGCGCAG CATCGCGTTT CCGCGCATGA ATGCGTACGC CTACTGGGTC
TTTCTGTTCG GCGGCGTGTT GCTGTTCGGC GCGCTCGCTG TCGGCGCAGG TCCGCGCGCG
GGCTGGTTCA GCTATGTTCC GCTCGCGGGC CCGGATTATT CAACCGGGAA AGGCTCGGAC
ATCTGGGCGC AGATGATCAC ATTCACCGAG CTTTCGGGGC TGCTCGAAGC CGTCGTGCTG
ATCGCGACGA TACTCAAGAT GCGCGCGCCG GGCATGTCGC TGAGCCGCAT GCCGCTGTTC
GTGTGGGCCA CGCTGGTCAC GCAGTTCATG GTGCTGTTCG CGATGCCTGC CGTGATGCTC
GCGAGTACCG CGCTGATTCT CGACCGGCTG GTCGGCACGC AGTTCTACAA CCCTTCGCTC
GGCGGCGATG TGCTGTTGTG GCAACACCTG TTCTGGTTCT TCGGGCATCC CGAGGTGTAC
CTGATCTTCA TACCGGCGCT CGGTCTTATG TCGTCGATCA TCGCGACATT CTCAAGACGT
CCCGTATTCG GTTATCCGGC GATGGTGCTG TCGTTGATCG CGACCGCGTT TCTCGCCTTC
GGGCTATGGG TGCATCACAT GTTCGCGACC GCGGTGCCCG AGCTCGGCAA GAGCTTCTTC
ACGGCGGCGA GCGTCATGAT CGCCGTTCCG TCGGGCGTGC AGATCTATTG CTGGCTGGCC
ACGCTGCTGA CCGGGCGGCT CAATCTGAAA GTGCCGCTCT TTTTCGTACT GGCGTTCTTC
TTCAATCTCG TGCTGGGGGG CATGACGGGT GTGATGCTCG GTTCGGTGCC GCTCGATTTG
CAGGTCCACG ACACCTACTT CGTGGTCGCG CACCTGCATT ACGTGCTGAT CGGCGGGGCG
GTGTTTCCGC TGTTCGGCGC GATCTATTAC TGGTTTCCGA AAGTAATGGG CCGCATGCTC
GACGAGCGGC TTGGCCGATG GCACTTCTGG CTGTTCTTCA TCGGCTTCAA CGTGACGTTT
TTCCCGATGC ATCTACTGGG CTTGCAAGGG ATGCCGCGCC GGGTGTGGAC CTATCCGCAC
GCAATGGGAT GGGACGGAAT GAACCTGGGC GCCACCGTCG GCGCCTGCGT GATGGCCGTA
AGTATCGTGA TCTTTCTGTT CAACGTGGCG CTCAACGCGC GCCGTGGGCG GCTCGCCGGT
GCGGACCCGT GGGGCGGCGG CTCGCTCGAA TGGAGCGTGT CGAGCCCGCC GCCGCCGCAC
AACTTCGATG CATTGCCTGT TGTGTACGCA CAGGAGCCGC TGTGGTCGGC GCGCCGCGAG
CCGCGCTTCG TGTCGGGACT CGCCGCCACG GCGCGCGAGG TGCTGACCAC TTCCGCACTC
GACGCGATAC CCGACACGCG CCCGCTGTTT CCATCGCCGT CTATCTGGCC GTTCATCAGC
GCGATCGCTA CGACGGTCTT CTTCATCGGC TCGATTTACA CGCCTTCGGC TGTCTGGTGG
GGCACAGTGC CCGTGGCGAT GGCGATGGTC GTCTGGTTCT GGCCGACGCG GCGCGAGAAT
GCCGTTGCGC GCGCGCTCGA GCGTTGGCCG GAACAGGCGG GGCGCGCGCA AAAGACGCGT
GTACCGCACG CCGCTTCATC GCGCGATGGT TCGTCCCTGG ATGCCCAGCC GTCGACGCTC
GATGTCCGCG CATTGCCCAG CTTCGGCTTT GGCGCGCGCA GCCTGATGTG GTGGGCAACA
GCGGGGCTCA TGCTGATCGA GGGCACAGTC TTCGCGCTCG CGGTCGCCGT CTATTTCTAT
CTGCGCACGG TGAACGCGTC ATGGCCAATG CATGCACCGC CGCCGTCGCT GCTGTGGGGT
TCGCTGAATA CGGCCGTGCT GATACTGAGC GTGGTTCCCA ACGAACTCGC AAGACGTGCC
GCCAACCAGG GCAATCGCGA ACTGGCGCGA CTGTGGCTCG CGGTATGCGT CGGCTTTGCG
TTGATCTTCC TCGTGCTGCG CGGCTTCGAA TTCACTGCGC TCAACGTGAT GTGGTACGCG
AACGCATACG GATCGATCGT CTGGACGCTG CTGGCTCTGC ACACGACGCA CCTGATCACG
GACACCGTCG ATACTGCCGT GCTCGCGGTG CTGCTATACA CGGGACCGTA CGAAGGCAAA
CGGCTCGTCG ACACCAGCGA GAACGCGTTC TACTGGTACT TCGTCGTATT GAGCTGGCTG
CCGATTTACG CGGTGATCTA TTTCGCGCCA CGGATGTCGC CATGA
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| Protein sequence | MSATGSRVVS DQNLELKDGP DAPRGTLDAL AQTWRDPPGL IGVLSAVNHK TIARRFIVTT
FVFFLLAGLL ALAMRVQLAR PDNRLISPDL YDQLFTTHGS AMMFLFAVPV MQAVAAWLVP
LMVGARSIAF PRMNAYAYWV FLFGGVLLFG ALAVGAGPRA GWFSYVPLAG PDYSTGKGSD
IWAQMITFTE LSGLLEAVVL IATILKMRAP GMSLSRMPLF VWATLVTQFM VLFAMPAVML
ASTALILDRL VGTQFYNPSL GGDVLLWQHL FWFFGHPEVY LIFIPALGLM SSIIATFSRR
PVFGYPAMVL SLIATAFLAF GLWVHHMFAT AVPELGKSFF TAASVMIAVP SGVQIYCWLA
TLLTGRLNLK VPLFFVLAFF FNLVLGGMTG VMLGSVPLDL QVHDTYFVVA HLHYVLIGGA
VFPLFGAIYY WFPKVMGRML DERLGRWHFW LFFIGFNVTF FPMHLLGLQG MPRRVWTYPH
AMGWDGMNLG ATVGACVMAV SIVIFLFNVA LNARRGRLAG ADPWGGGSLE WSVSSPPPPH
NFDALPVVYA QEPLWSARRE PRFVSGLAAT AREVLTTSAL DAIPDTRPLF PSPSIWPFIS
AIATTVFFIG SIYTPSAVWW GTVPVAMAMV VWFWPTRREN AVARALERWP EQAGRAQKTR
VPHAASSRDG SSLDAQPSTL DVRALPSFGF GARSLMWWAT AGLMLIEGTV FALAVAVYFY
LRTVNASWPM HAPPPSLLWG SLNTAVLILS VVPNELARRA ANQGNRELAR LWLAVCVGFA
LIFLVLRGFE FTALNVMWYA NAYGSIVWTL LALHTTHLIT DTVDTAVLAV LLYTGPYEGK
RLVDTSENAF YWYFVVLSWL PIYAVIYFAP RMSP
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