| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4749 |
|---|
| Symbol | |
|---|
| ID | 6246265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1818680 |
|---|
| End bp | 1821025 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642596497 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001860904 |
|---|
| Protein GI | 186473562 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.872225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.641352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGATG ACGACGATCG AAACACTTCC TTTCCCGAGG ACTGGTGCCG TCGATGGACC
AGTGCCGTGG AAGACTATGC CGTGATCGGA CTTTCGCCCG ACGGAACGAT CAGAACATGG
AATCGGGGAG GCGAGCGAAT CCACGGCTTT TCCGCGGAAG AAGCGATCGG AAAACCATTC
GATATCTTTC ACACCCTTGA AGACCGCGAA GTCGGCCGCG CCGCAGCCGC GCTCGATACC
GCGCGGTCCA CGGGACGCGC CGAGTCCGAG GGATGGCGGC TGCGCAAGGA CGGCTCGCGC
TTCTGGGCGA ATGTCGTGAT CACCCCGCTG ACGGGGGACG ACCGCCGCGT GCTGGGTTTC
GGCAAGATCG TGCGCGACAT GACCGACAAG CGCAGGGCGC ATGAGGCGGT GGTCGAAAGC
GAACGGCGCT TTCGCACACT CGTGAACGGC GTGACGGACT ACGCAATCTT CATGCTGTCG
CCCGAAGGTA TCGTCACGAA CTGGAATGCG GGCGCCCGTC GGATCAAGGG ATACAGCGCG
GACGAAATCA TCGGCTCGCA TTTTTCGCGC TTCTACACGC CGGACGATGC AGCGGCGGGA
CTGCCGCAAC GCGGCCTCTC GGTGGCCGCA AAAGAAGGAC GATTCGAAGC CGAAGGCTGG
CGAGTGCGCA ACGATGGCAA GCGATTCTGG GCGCACGTGG TCATCGACGC CATCCGCGAC
GACAACGGCG AACTGATCGG CTTCGCCAAG ATCACGCGAG ACATCACCGA GCGCATGGAA
GCCAACCGGG CCCTCGAAGA AACCCGCAAG GCGCTGTTCC AGGCGCAGAA GATGGAAGCG
GTAGGAAAGC TGACAGGCGG AGTCGCCCAC GACTTCAACA ACGTCCTCCA GATTCTGCGG
GGCAATCTGG AATTGCTGGA CAGCCGCCAT CACCGCGACC CCTGGTCGCG TGACCGGATC
TACAAGGCGA TCGATGCCGT CGACCGGGGC TCGAAGCTTG CGTCGCATCT GCTGGCGTTC
GGCCGCCAGC AGCCGCTGCA GCCCGTCGCG ATCAATCTCG CCGCCGCGCT GCGCGGGATG
GACGATCTGC TGCGCCGCGC GCTTGGCGAG ACAGTCCGGG TCGAAACGGT GGTCGGAGGC
GGCCTGTGGA ACACGCTCGT CGATATTCAC CAGTTGGAGA ACGTCATTCT CAACCTCGCC
ATCAATGCGC GCGATGCGAT GCCGCATGGC GGCAAGCTGA CCATGGAGCT GTCCAACGCG
ATGCTGGACG ACGAGTATGT CGCCACCGTC CCCGACCTCG CAGCGGGACA ATATGTGATG
CTCGCCGTCA CCGACACCGG AACGGGAATG CCACAGGACG TGCTGGAGCG CGCGTTCGAT
CCGTTCTTTA CGACGAAACC GGAAGGCGAA GGCACGGGCC TCGGGCTCAG CATGGCGTAC
GGTTTCGTCA AGCAAAGCGG CGGCCATATC AAGATTTACA GCGAGACGGG CCACGGTACG
ACCGTCAAGA TCTATCTTCC CCGCTCCACG CAGCCCGCCG TGGAACCGCC ACGGCGAACT
CGCGCTCCCG TCAAGGGGGG AACCGAAACC ATTCTGGTGG TCGAGGACGA CAGGAAGGTG
CAGTCGACGG CCATCGATAC GCTGACGGGT CTCGGCTACC GGGTGCTCAA AGCCGACGAC
GCGCAGCAGG CGCTGACCGT ATTGCGTAGC GGCGTGGACG TCGACCTGCT GTTTTCCGAC
GTGGTGATGC CCGGCCCGAT ACGCAGCACC GACATGGCGG CGCAAGCGAC GCTTTTGCTG
CCGCGCATGA AGGTGCTGTT CACGTCGGGT TATACGCACA ATGCCATCGT GCATGGGGGC
CGGCTCGACC CCGGCGTCGA ACTCCTCAGC AAACCCTATA GCCGCGACCA GCTCGCCCGG
AAAATCCGCC AGATGCTCGA TGCGCCCGGC AAGCCGGATG CGGATCAACC CGGCGGTGCG
CCTGCCGTCG CCGCGACGCC GCTGCGCATT CTCATCGTCG ACGACGATGA GAATCTCTCT
GAAGCAATCA GCGAGCAGAT CGGCGTCCTC GGCTACACGC GCAAGTCGAC GACGTCGGCA
CACGAGGCGC TGCAATGGCT AAGTGAAGAG ACATTCGATG TGCTGATGAC CGACCTCCGC
ATGCCCGGCC TGGGCGGCGT CGAACTCGCG AAGCGAGCCG TCGCCATACG GCCTGCACTA
CACGTGTTGT TCTCGTCCGG TTATGACATG ACGGACTCGC CAGCGATGCC GTTCCGCTGG
GCTTCACTGC GCAAGCCGTT CACGGTCGAG GAACTGCGGG CCGTGCTGGA AGGCTTCCGT
CAGTGA
|
|---|
| Protein sequence | MHDDDDRNTS FPEDWCRRWT SAVEDYAVIG LSPDGTIRTW NRGGERIHGF SAEEAIGKPF
DIFHTLEDRE VGRAAAALDT ARSTGRAESE GWRLRKDGSR FWANVVITPL TGDDRRVLGF
GKIVRDMTDK RRAHEAVVES ERRFRTLVNG VTDYAIFMLS PEGIVTNWNA GARRIKGYSA
DEIIGSHFSR FYTPDDAAAG LPQRGLSVAA KEGRFEAEGW RVRNDGKRFW AHVVIDAIRD
DNGELIGFAK ITRDITERME ANRALEETRK ALFQAQKMEA VGKLTGGVAH DFNNVLQILR
GNLELLDSRH HRDPWSRDRI YKAIDAVDRG SKLASHLLAF GRQQPLQPVA INLAAALRGM
DDLLRRALGE TVRVETVVGG GLWNTLVDIH QLENVILNLA INARDAMPHG GKLTMELSNA
MLDDEYVATV PDLAAGQYVM LAVTDTGTGM PQDVLERAFD PFFTTKPEGE GTGLGLSMAY
GFVKQSGGHI KIYSETGHGT TVKIYLPRST QPAVEPPRRT RAPVKGGTET ILVVEDDRKV
QSTAIDTLTG LGYRVLKADD AQQALTVLRS GVDVDLLFSD VVMPGPIRST DMAAQATLLL
PRMKVLFTSG YTHNAIVHGG RLDPGVELLS KPYSRDQLAR KIRQMLDAPG KPDADQPGGA
PAVAATPLRI LIVDDDENLS EAISEQIGVL GYTRKSTTSA HEALQWLSEE TFDVLMTDLR
MPGLGGVELA KRAVAIRPAL HVLFSSGYDM TDSPAMPFRW ASLRKPFTVE ELRAVLEGFR
Q
|
|---|
| |