| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4735 |
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| Symbol | |
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| ID | 6246251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1800618 |
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| End bp | 1802687 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642596483 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001860890 |
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| Protein GI | 186473548 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0595206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.234911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCA CTTACAATCT GGGTCTGGTT GTCGTGTCGC TCGCCGTCGC AACACTCGCT
TCGTACACGG CGCTCGACCT GGCCGGACGT ATTTCGACAA TGGCATCGGC ACGGCTGCGC
CACCTTTGGC TCGCAGGCGG CGCAGCAGCA ATGGGTACGG GCGTCTGGTC GATGCACTTC
ATCGGCATGC TCGCATTCTC GCTGCCGATT CCGCTCGGCT ACGACTTAGC GATCACCGGC
TGCTCACTCG GCATCGCGAT GATCGTGTCG TACTTCGCGC TCCACCAGGT GGCGCGTCCG
ACGCTTCCCA TCAAGCGTCT GGTCACGGGC GGCGTGCTGA TGGGCTTCGG CATTGCGGGC
ATGCACTACA CGGGCATGGC CGCGATGCGG ATGGAGCCCG GTATCCGGTA TCGTCCGGGC
CTCTTCGCCG CATCGATCGC GATTGCCATC GCGGCGTCGA TCGCGGCGCT GTGGATCGCC
CACACGCTGC GCGACTCGAA CCAGCATCGC GTGCTGCTCA AGCGCCTCGG CGCAGCATGC
GTGATGGGCC TCGCGATCAC GGGCATGCAC TATACGGGCA TGGCCGCCGC CGACTTCCAG
CCCGGCTCCA TCTGCGGCGC TGCGCGTGGC GTCAACGCGC AATGGCTCGC GACGACCATT
CTCCTGTTCA CGTTCGCGAT TCTGATCGTC ACGCTGATCC TGTCGCGCTT CGATGCGCGC
ACTACGTTCC TTGCCGGTTC GGTGTCGCTG CTGAACAACC AGATCGTGCG TCTTGCCACC
TACGACACGC TCACCAATCT GCCGAACCGC GTCACACTGA CTGAGCGCAT CGAGCACGCG
ATTCGCACGT CGAAGCTCAA CGGCCGCGGC TTCGCGATCC TGTTCATGGA TCTCGACGGC
TTCAAGACAA TCAACGACTC GCTCGGCCAC GCGTTCGGCG ACGAAGTGCT GAAGTCGTTC
TCGCACAGCC TGCGGCAATG CGTGCGTAAC GTCGATACCG TCGCGCGCCT GGGCGGCGAC
GAGTTCGTCG TGCTGGCCGA AAGCCTCGGT GCGCCGCAGG ACGCGCAGAA GATGGCAGAA
GCGGTGCTCG ACCGGATGCG CAAGGGCATC GAGACGCAGA GCCAGACGCT GCAGGTCATG
CCGAGCATCG GCATTGCGCT GTATCCACAG GACGGCCATT CCGTCGACGA ACTGCTCAAG
CATGCCGACG CCGCGATGTA CGAAGCGAAG CGCGGCGGCC GCAGCACTTA CCGGTTCTTC
GAAGCGCACA TGAACGAAGC TGCGATGCGC ACGCTCAAGA TCCAGAGCGC GCTGCACGAG
GCGCTCGGCA AGGGCTATTT CTCACTGCAC TTCCAGCCGA AGTTTCGCGG CGACAGCGGC
GAGGTCGCGG GCGCGGAAGC GCTGATCCGA CTGAATCATC CGGAGATCGG CGCGCTCGCG
CCGATGGACT TCATTCCGAT CGCCGAACGC TCGGGGCAGA TCGTGCAGAT CGGGTATTGG
GTCGTGCGCG AAACGTGCCG CCAGATCCGC CGCTGGGAAG CGTCCGGATT GCCGTCGATG
AAAGTCGCGA TCAACCTGTC GCCGCGCCAG ATGACGCAAC CGGATCTCGT CGCGAAGACG
CTGGAGATCG TGCATGCGGA AGGCGTCGAT TGCAGCCAGG TCATGTTCGA GATCACCGAA
ACGGTGGCGA TGCAGGACGC GGCCAAAACG ACGGAAATGA TCCGCGAGTT CCAGGCCAGC
GGCTTCGAGA TTTCGATCGA CGACTTCGGC ACCGGCTATT CGAGCCTCGC CTATCTGCAA
CGCTTCCGCG TGAAGCAACT GAAGATCGAC CGATTCTTCA CGAACGGGCT CGATGCCGAT
GGCCACGAAG GCAGCGCGAT CGTGCAGGCG ATCATCGCGC TCGCGCACTC GCTGGAAATG
GATGTGGTGG CGGAAGGCGT CGAAACCGCC TCGCAACTCG ACAAGCTCAA AGACCTGCAA
TGCGACGAGA TGCAAGGCTT TCTACTGGGC AGGCCGCTCA CGGCCGACGC CTTCAGCGAG
CTGCTCCAGG CACGCGTGAC CGCGGCCTGA
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| Protein sequence | MQSTYNLGLV VVSLAVATLA SYTALDLAGR ISTMASARLR HLWLAGGAAA MGTGVWSMHF
IGMLAFSLPI PLGYDLAITG CSLGIAMIVS YFALHQVARP TLPIKRLVTG GVLMGFGIAG
MHYTGMAAMR MEPGIRYRPG LFAASIAIAI AASIAALWIA HTLRDSNQHR VLLKRLGAAC
VMGLAITGMH YTGMAAADFQ PGSICGAARG VNAQWLATTI LLFTFAILIV TLILSRFDAR
TTFLAGSVSL LNNQIVRLAT YDTLTNLPNR VTLTERIEHA IRTSKLNGRG FAILFMDLDG
FKTINDSLGH AFGDEVLKSF SHSLRQCVRN VDTVARLGGD EFVVLAESLG APQDAQKMAE
AVLDRMRKGI ETQSQTLQVM PSIGIALYPQ DGHSVDELLK HADAAMYEAK RGGRSTYRFF
EAHMNEAAMR TLKIQSALHE ALGKGYFSLH FQPKFRGDSG EVAGAEALIR LNHPEIGALA
PMDFIPIAER SGQIVQIGYW VVRETCRQIR RWEASGLPSM KVAINLSPRQ MTQPDLVAKT
LEIVHAEGVD CSQVMFEITE TVAMQDAAKT TEMIREFQAS GFEISIDDFG TGYSSLAYLQ
RFRVKQLKID RFFTNGLDAD GHEGSAIVQA IIALAHSLEM DVVAEGVETA SQLDKLKDLQ
CDEMQGFLLG RPLTADAFSE LLQARVTAA
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