| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4636 |
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| Symbol | |
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| ID | 6246153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1706593 |
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| End bp | 1708158 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642596385 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001860792 |
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| Protein GI | 186473450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00362376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.387542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGT TTGAACAAAC CCGCAACCTG AGTGGCTTCG GACGAGCGGC GGCGAGCGCG
CTGCTGATGC TGCTGCTTGC GGCGTGCTCG GTGGAGCCGA CGTACAACCG TCCCGACGCA
CCGACACCGT CGGCATTCAA GGAAGCGCCC GCTACGGCCA CGACGGGCGA CGCAGCAGCC
GCGCCGCTGC CCGCGAGCGA AGCGGGCACG TGGAAGACGG CCGAGCCCGC CGAGGACGCG
CATCGCGGCG AATGGTGGAC CGTATTCGGC GATTCGACGC TCAACGCGCT CGAAAAGCAG
GCGGCCGATG CGAATCAGGA TCTGAAGGCA GCCGCCGCGC GCGTGCAGCA GTCGCGCGCG
CTGACGAACG AGGCGCGCGC CGCGTGGTAC CCGTCGATCG ATGCAGGCTT CGGTCCGACG
CGCGAACGGC TGTCGCCGGC TTCGCAGAAC CTGCCTAACA ATGCGAACGT GCCGACGCAA
ACGCTCTGGC GTGCGCAGAC TACGGTTGCG TATGAAGTCG ACCTGTTTGG CCGCGTGAGT
TCGAACGTGC ATGCAGCGAG TGCCGACGAG GCGCAGAGCG AAGCGTTGTT CCGCTCGGTG
CAGCTTGCGT TGCAGGCCGA CGTCGCGCAG AACTATTTCC AGTTGCGCGA GTTCGATACG
CAGTTGAGCC TGTATCGTCA GACGGTGACG TTGCGTGAAA ACGCGTTGAA GCTCGTCGAG
CGACGCTTCA ACGAAGGCGA CATCAACGAA CTGGACGTAT CGCGTGCCCG CAATGAACTG
GCGACGGCGC GCGCCGATGC TGTCGGCGTC GCGCGTCAGC GTGCGGCATC GGAGCATAGC
CTCGCGATCC TGCTCGGCAA GCCGCCTGCG GACTTTACGT TCCCCGAGAC GCCGCTCGCG
CCCGTGACGG TGCAAGTGCC TGCCGGATTG CCATCTGCGC TGCTCGAGCG TCGTCCGGAT
ATCTCCGCGG CGGAGCGCGG CATGGCGGCC GCGAACGCAC GCGTCGGTCT CGCCAAGTCG
GCATTCTTCC CGAAGCTCGA CATCACAGGT GCATTCGGTT TCGAATCGGC GACGCTCGGA
GATCTGTTCA TGTGGTCGAG CCGTGCGTTC CTGCTCGGTC CGTTCGCGGG CACCGCGCTG
ACGGTGCCGA TCTTCGACGG CGGACGGCGC AAGGCGAATC TCGCGAACGC GCGCGCGAAG
TATGACGAGG ACGTTGCGCA GTATCGTCAG CAGGTGCTCG TGGCGTTCCG CGAAGTCGAG
GACAACCTGT CGGACCTGCG TCTGCTCGGC GATCAGACGC GTGAGCAGAA CAATGCCGTC
AACGCCTCGC AGCGCGCCGA ACATCTGTCG CAGACGCAAT ATCAGGAAGG ACAGGTCAGC
TATCTCGACG TGATCGATGC CCAGCGCCAG GTGCTGCAGT CGCAACTGCA ATTGAGTCAT
CTCGCGGGCA CGCAGGCGGT GGCGACCGTC AACCTGATTC GCGCGCTCGG CGGCGGATGG
GGCGACGTGA AGACGGATGT GGGCAACGCG GACACGGCCG CGCAGGCGCA ACTGGCGAAG
CGTTGA
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| Protein sequence | MKRFEQTRNL SGFGRAAASA LLMLLLAACS VEPTYNRPDA PTPSAFKEAP ATATTGDAAA
APLPASEAGT WKTAEPAEDA HRGEWWTVFG DSTLNALEKQ AADANQDLKA AAARVQQSRA
LTNEARAAWY PSIDAGFGPT RERLSPASQN LPNNANVPTQ TLWRAQTTVA YEVDLFGRVS
SNVHAASADE AQSEALFRSV QLALQADVAQ NYFQLREFDT QLSLYRQTVT LRENALKLVE
RRFNEGDINE LDVSRARNEL ATARADAVGV ARQRAASEHS LAILLGKPPA DFTFPETPLA
PVTVQVPAGL PSALLERRPD ISAAERGMAA ANARVGLAKS AFFPKLDITG AFGFESATLG
DLFMWSSRAF LLGPFAGTAL TVPIFDGGRR KANLANARAK YDEDVAQYRQ QVLVAFREVE
DNLSDLRLLG DQTREQNNAV NASQRAEHLS QTQYQEGQVS YLDVIDAQRQ VLQSQLQLSH
LAGTQAVATV NLIRALGGGW GDVKTDVGNA DTAAQAQLAK R
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