| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4537 |
|---|
| Symbol | |
|---|
| ID | 6246056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1595953 |
|---|
| End bp | 1596741 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642596288 |
|---|
| Product | 4-oxalocrotonate decarboxylase |
|---|
| Protein accession | YP_001860695 |
|---|
| Protein GI | 186473353 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATG ACAACCGCAT CGAGTCGATG GCCGCGCGCC TGCGTGAAGC GCAGTCCTCG
CGTCAGACGA TCGCGCCGCT GCGCGAAGCC TGTCCCGAAG GCGACGCGAC GCTCGCCTAC
GCGATCCAGC AGGTCAACAA CGACTTGCGC GCGGCGAACG GCGAGCGCCT CGTCGGCAGA
AAGATTGGCC TGACTTCGCC GGCGGTGCAG AAGCAACTGG GCGTCGGTCA GCCGGACTTC
GGCGCACTGT TCGCGTCGAT GGCTTACGGC GACAGCCAGC CGATGCCGCT TGCCTCGCTG
GTCCAGCCGA AGGTCGAAGC GGAGATCGCG CTCGTGCTCG AACGCGATCT GACCGCCGAA
AAAAACACAT TTGCGGATCT GATCGGCGCG ACCGCGTATG CGCTGGCCGC AATCGAGGTC
GTCGACAGCC GCATCCGCGA CTGGGACATC CGCTTCTTCG ACACCGTCGC GGACAACGCA
TCGAGCGCGC TGTTCGTGCT CGGCAGCCGA CCGGTTCTGC TGCGCGACAT CGACCTTACC
GCCTGCGCGA TGACGCTCAC GCAGGACGGC GAAATCCTGT CGCGCGGCAA TGGCACGGCG
TGTCTCGGCA ATCCGCTCAA CGCGGCCGCG TGGCTCGCGG ACCGCATGGT GCGGCTCGGC
ACGCCGCTGC GCGCGGGCGA CATCGTGCTG ACGGGCGCGC TCGGCCCGAT GGTCGCGGTC
AAAGCAGCGG GCACCTATAC GGCGCATATC GAAGGGCTCG GCAGCGTGCG CGCCAGTTTC
AGCGAGTAA
|
|---|
| Protein sequence | MSDDNRIESM AARLREAQSS RQTIAPLREA CPEGDATLAY AIQQVNNDLR AANGERLVGR
KIGLTSPAVQ KQLGVGQPDF GALFASMAYG DSQPMPLASL VQPKVEAEIA LVLERDLTAE
KNTFADLIGA TAYALAAIEV VDSRIRDWDI RFFDTVADNA SSALFVLGSR PVLLRDIDLT
ACAMTLTQDG EILSRGNGTA CLGNPLNAAA WLADRMVRLG TPLRAGDIVL TGALGPMVAV
KAAGTYTAHI EGLGSVRASF SE
|
|---|
| |