| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4518 |
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| Symbol | |
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| ID | 6246038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1567038 |
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| End bp | 1569470 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642596270 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001860677 |
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| Protein GI | 186473335 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.101955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC ATTGGGTCGA CATCAAGAAC GCGGACGTGA TTCTCGTCAT GGGCGGCAAT
GCGGCCGAGG CGCACCCGTG CGGGTTCAAA TGGGTCACTG AGGCAAAGGC GCACAACAAG
GCGAAGCTGA TGGTCGTCGA TCCGCGTTTC ACGCGCACGG CTTCCGTCGC GGACTTCTAT
GCGCCGATTC GCACGGGTAC GGATATCGCG TTCCTGGGCG GCGTGATCAA CTATCTGCTG
ACCAACGACA AGATCCAGCA CGAGTATGTG AAGAACTACA CGGATTTTCC GTTCATCGTC
CGTGAAGACT TTGCGTTCAA CGACGGCATC TATTCCGGCT ACGACGCGAA CGAGCACAAG
TACGCAGACA AATCGACGTG GGATTACGAG CGTGGCGACG ACGGTTTCGT GAAGGTCGAC
ATGTCACTGC AGAATCCGCG CTGCGTGTAC AACCTGCTGA AGCAGCACTA TTCGCGCTAC
ACGCCAGAGA TGGTCGAGAA AACCTGCGGC ACGCCGAAGG ACAAGTTCCT GCACGTGTGC
GAGACGCTGG CGAGCACCGC GACGCCTGGC CGCGCAGGCA CGATTCTCTA TGCGCTCGGC
TGGACGCACC ATTCGATCGG CGCGCAGATG ATCCGCACGG GCGCGATGGT GCAGCTGCTG
CTGGGTAACA TCGGCATCGC GGGCGGCGGC ATGAACGCAT TGCGCGGGCA CTCGAACATT
CAGGGGCTCA CGGACCTCGG TCTGATGTCG AATCTGCTGA CGGGCTACAT GACGCTTCCG
AACGAACCCG AACAGGACTT CGACGGCTAC ATCCAGAAGC GCGCGTCGCA GCCGCTGCGG
CCGAACCAGT TGAGCTACTG GAAGAACTAC CGCGCGTTTT TCGTCAGCAT GATGAAGTCG
TGGTGGGGCG ACGCGGCAAC GGCGCAGAAC AACTGGGGTT ACGACTATCT GCCCAAGCTC
GACAAGCCAT ACGATCTGCT GCAGGCCATC GAACTGATGA ATCAGGGGAA GATGAATGGC
TACATCTGCC AGGGCTTCAA CCCGCTCGCG GCAGCGCCGA ACAAAGGCAA GACGACCGTG
GGCCTCGGCA AGCTCAAGTG GCTCGTCATC ATGGACCCTC TGGCCACGGA AACCTCCGAG
TTCTGGAAAA ACCACGGCGA GTACAACGAC GTCGATTCGT CGAAGATCCA GACGGAGGTG
TTTCGTCTGC CTACTACATG CTTTGCGGAA GAACGCGGCT CGCTGGTCAG TTCGAGCCGT
GTGCTGCAAT GGCACTGGCA GGGCGTCGAA GCGCCGTTCG AAGCGCGCAG CGATCTCGAG
ATCATGTCGG GCCTCTTTCT GCGCATGCGC AAGGCCTATC AGGAGCAGGG CGGCAAGTAT
CCCGATCCGA TCGTCAACCT GACGTGGCCG TACGCGCGTC CCGACAGCCC TACGCCCGAA
GAGATCGCGA TGGAGTACAA CGGCCGCGCG CTCGCCGATC TGCCCGATCC GAAGGACGCC
TCCAGGGTGC TGGTGAAGAA GGGCGATCAG CTGGCGGGCT TCGCGCAACT GAAGGACGAC
GGCACGACGG CGAGCGGCTG CTGGATCTTC TGCGGCGCGT GGACCCAGGC GGGCAACCAG
ATGGGGCGGC GCGACAACAG CGATCCGACG GGCATTGGTC AAACCTTGAA CTGGGCATGG
GCGTGGCCTG CGAACCGGCG CGTGCTGTAC AACCGCGCAT CGTGCGATCT GAACGGCAAA
CCGTTCGATC CGAAACGCAA GCTGATCGCA TGGAACGGCG CAAGCTGGAG CGGTCCCGAC
ATTCCTGACT TCAAGCTCGA CGAAGCGCCG GAAAACGGCA TGGGGCCCTT TATCATGAAT
CCGGAAGGCG TCGCGCGCTT CTTCGCGCGC GACGGTATGA ACGAAGGACC GTTCCCCGAG
CACTACGAAC CGTTCGAAAC GCCGCTCGGC TACAACACCT TCCATCCGGA CAATCCGCAG
GCGACCAGCA ACCCCGCTGC GCGTGTGTTT CCCGATGATC GCAAGGCATT CGGCAAGGCG
GCTGATTTCC CGCATACGGC GACCACCTAT CGTCTGACGG AACACTTCCA CTTCTGGACC
AAGCATGCGC GCCTGAACGC GATCGTGCAG CCGCAGCAGT TCGTCGAGAT CGGCGAGGAT
CTCGCGAAGC AGATCGGCGT GGTGGCAGGC GACCGCGTGA AAGTGTCGAG CAACCGCGGG
CACATCATCG CCGTGGCTGT GGTCACGAAG CGGATCAAGC CGCTGACGAT CGACGGCAAG
AAGGTGCAGA CCGTCGGCGT GCCGCTGCAT TGGGGCTTCA AGGGGCTGAC CAAGCCGGGC
TACATCACCA ACACGTTGAC GCCTGTCGTG GCCGACGCGA ATTCGCAGAC ACCGGAATTC
AAGTCGTTCC TCGTGAAGGT CGAAAAGGCA TAG
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| Protein sequence | MTNHWVDIKN ADVILVMGGN AAEAHPCGFK WVTEAKAHNK AKLMVVDPRF TRTASVADFY
APIRTGTDIA FLGGVINYLL TNDKIQHEYV KNYTDFPFIV REDFAFNDGI YSGYDANEHK
YADKSTWDYE RGDDGFVKVD MSLQNPRCVY NLLKQHYSRY TPEMVEKTCG TPKDKFLHVC
ETLASTATPG RAGTILYALG WTHHSIGAQM IRTGAMVQLL LGNIGIAGGG MNALRGHSNI
QGLTDLGLMS NLLTGYMTLP NEPEQDFDGY IQKRASQPLR PNQLSYWKNY RAFFVSMMKS
WWGDAATAQN NWGYDYLPKL DKPYDLLQAI ELMNQGKMNG YICQGFNPLA AAPNKGKTTV
GLGKLKWLVI MDPLATETSE FWKNHGEYND VDSSKIQTEV FRLPTTCFAE ERGSLVSSSR
VLQWHWQGVE APFEARSDLE IMSGLFLRMR KAYQEQGGKY PDPIVNLTWP YARPDSPTPE
EIAMEYNGRA LADLPDPKDA SRVLVKKGDQ LAGFAQLKDD GTTASGCWIF CGAWTQAGNQ
MGRRDNSDPT GIGQTLNWAW AWPANRRVLY NRASCDLNGK PFDPKRKLIA WNGASWSGPD
IPDFKLDEAP ENGMGPFIMN PEGVARFFAR DGMNEGPFPE HYEPFETPLG YNTFHPDNPQ
ATSNPAARVF PDDRKAFGKA ADFPHTATTY RLTEHFHFWT KHARLNAIVQ PQQFVEIGED
LAKQIGVVAG DRVKVSSNRG HIIAVAVVTK RIKPLTIDGK KVQTVGVPLH WGFKGLTKPG
YITNTLTPVV ADANSQTPEF KSFLVKVEKA
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