Gene Bphy_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4506 
Symbol 
ID6246026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1553047 
End bp1553616 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content57% 
IMG OID642596258 
ProductXRE family transcriptional regulator 
Protein accessionYP_001860665 
Protein GI186473323 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.690344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGA CACTTGAGAA GGACACGGCA CTTGCACTGG GGAGCAAGAT CCGCGCGCTG 
AGGCAAAGGC TGAAGCGCAC GCTCGATGAA ACAGCAACGG CAGCAGGCAT TTCGAAGCCG
TTCCTGTCGC AGGTCGAGCG CGGTCTCGCG TCGCCATCCA TCACTTCGCT GGCGGGAATT
GCGAATGCGT TGGGTGTGAA AGTGCAGTAC TTCGTCGACA CACCGAGCGA AGAACGTACG
GTGTGTCGAG CAAACGAACT GAAGTTTTTT GGATTTGCAG ACTCGGCGAA TCTGTTTGCC
CGGATGACCA ATCTGTCGGG GGGCCGTCAG TTGGAAGCCA TCCTTGTGAG GATGCCACCC
GGGCAAAAGC GTTCCGAAGT CACGACACAT GCCGGTGAAG AGTTCATCTA TGTCATCGAA
GGGCAAGTGT CGTTGACGCT GGAAGGAAAA ACCTTCGTGC TGCGTGCGGG AGATAGCGCG
CATTACGAAT CGACGGTGCC GCATAGCTGG GCCAACACGG CCCGCAAGGA AACGGTCGTC
GTCTGGGTGG GTACGCCAAG GCTGTTTTAG
 
Protein sequence
MVTTLEKDTA LALGSKIRAL RQRLKRTLDE TATAAGISKP FLSQVERGLA SPSITSLAGI 
ANALGVKVQY FVDTPSEERT VCRANELKFF GFADSANLFA RMTNLSGGRQ LEAILVRMPP
GQKRSEVTTH AGEEFIYVIE GQVSLTLEGK TFVLRAGDSA HYESTVPHSW ANTARKETVV
VWVGTPRLF