| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4505 |
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| Symbol | |
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| ID | 6246025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1551222 |
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| End bp | 1552838 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642596257 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001860664 |
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| Protein GI | 186473322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.218353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.347947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CGTTCGTCTC TACGGCGGCG CTGACCGCGC TCGTCCTTAC ACTTCAGCAA
AACGCATCGG CCGTCACAAT TCCGTCCGGC GTGACGCTTG CCCCGAGCCA GGAACTGACG
CGCCAGGTGC CCGCCGAAAC CGAATCGCTC GATCCCGCGC ACATCGAATC GTGGACGGGC
AACACGATCG GCCTCGATCT GTTCGAGGGC CTCACGCGCA TCGACGCATC GGGCGCGATC
GTGCCGGGCG TCGCGCAGTC GTGGACGCGC ACGGCACCCG ACACGTGGGT TTTCAAGCTG
CGTCACGACG CCAGGTGGAG CAACGGCCAG CCCGTCACGG CCGCCGACTT CGTCTACGCA
TGGCAGCGCG TCGTCGATCC GAAGACGGGT TCGAAGTACA CGATCCTCGT GGAGTTCGTG
AAGAATGCGA AGACGATCAT CGCGGGCAAA GCGCCCGTCA CGAGTCTCGG CGCACGCGCC
GTCGATCCGT ACACACTCGA AGTAAAAACG GAAGTGCCTG CCGCGTTCTT CCCGCAACTC
GCGGCGATGG CGACGATGGC GCCCGTCGAC AAGGCCGTCG TAACGAAGTT CGGCAACGAC
TGGACGCGTC CGGCGAACTT CGTCGGCAAC GGCGCGTTCT CGCTCACCGA CTGGCAGCCG
AACAACCGCC TCGTCGTCAC GAAGAGCAAC AACTACTGGA ACGCGCCGAA GGTGGCCATT
TCGAAGGTCA CGTATCTGCC TATCGAAAGC GACGAAACGG CCATGCGCAT GTATCAGGCG
GGCCAGTTCG ACTACACATA CACGATTCCT TCTGGCATCT TCAATCAGGT CGACAAGCAG
TTCGGCCAGC AACTGCAGAA GGGTTTGCAG ATCGCGACGT ACTACTACAG CCTGAACAAC
GACGAGCCCG TGTTCAAGGA CAAGCGCGTG CGCGAGGCGC TGTCGATGGT GATCGATCGC
GATCTGCTCA CATCGAAGCT CACGTCGAGC GGCGAACTGC CCATGTACGG CCTGATTTCG
AAGGGCACGG AAGGCGCCGC CGTCTTCAAG CCGGAGTGGG CATCGTGGCC GATGGCCAAG
CGCGTCGACA CTGCTCGCAA TCTGCTGAAG GAAGCGGGCT ATTCCGATGC GAAGCCGCTC
ACGTTCACCT TCACGTACAA CACGAACGAT CTGCACAAGA AGGTTGCCCT CTTCGTCACA
TCCGAATGGC GCACGAAGCT CGGCGTCAAC GCGAAGCTCG AGAATGTCGA ATACAAGGTG
CTGCTCAAGC AGCGTCATGA CGGCAAGGTG CAGGCATCGC GCGACGGCTG GTTCGTCGAC
TACAACGACG CGATGTCGTA CTTCGACCTG ATCCGCTGCG GCAGCGTGCA GAACGACCAG
CACTACTGCA ACCCGAAGGT CGACGCGCTG ATCGACCAGG CGAACCAGCA GACCGACGAC
AAGCAACGCA CCGCGTTGCT GACGCAGGCA CATGAACTCG CGATGAACGA CTATCCGCTG
ATCCCGCTGT TCCAGTATTC GGCGGCGCGT CTCGTGAAAC CGTATATCGG CGGTTATGCG
TCGACGAACT ACCTCGACAT GCGCTCGTCG CAAGATATGT ACGTGCTCAA GCACTAA
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| Protein sequence | MNKTFVSTAA LTALVLTLQQ NASAVTIPSG VTLAPSQELT RQVPAETESL DPAHIESWTG
NTIGLDLFEG LTRIDASGAI VPGVAQSWTR TAPDTWVFKL RHDARWSNGQ PVTAADFVYA
WQRVVDPKTG SKYTILVEFV KNAKTIIAGK APVTSLGARA VDPYTLEVKT EVPAAFFPQL
AAMATMAPVD KAVVTKFGND WTRPANFVGN GAFSLTDWQP NNRLVVTKSN NYWNAPKVAI
SKVTYLPIES DETAMRMYQA GQFDYTYTIP SGIFNQVDKQ FGQQLQKGLQ IATYYYSLNN
DEPVFKDKRV REALSMVIDR DLLTSKLTSS GELPMYGLIS KGTEGAAVFK PEWASWPMAK
RVDTARNLLK EAGYSDAKPL TFTFTYNTND LHKKVALFVT SEWRTKLGVN AKLENVEYKV
LLKQRHDGKV QASRDGWFVD YNDAMSYFDL IRCGSVQNDQ HYCNPKVDAL IDQANQQTDD
KQRTALLTQA HELAMNDYPL IPLFQYSAAR LVKPYIGGYA STNYLDMRSS QDMYVLKH
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