| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4494 |
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| Symbol | |
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| ID | 6246014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1538728 |
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| End bp | 1539852 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642596246 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001860653 |
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| Protein GI | 186473311 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.001486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.244602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACCA CTCCTTCCAT TGCGCCGTCC GCGGTCGCAG GCGCGGCGAA GCAGGCGCGC
AGCATTCCGT GGATGCTACT GGCGGTGATC TCGGTGATCG TCGTGATCGC AGCCGCCACC
TCATACTGGT TCTTCGTGGG CCGTTTTGTC GAAACCACTG ACGACGCCTA TGTCGGCGGC
GACGTCACCG TGCTGGCGCC GAAAGTGAAC GGCTTCGTCA GCGACGTGCT GGTGCAGGAC
AATCAGTACG TGACAGCGGG CCAGGTGCTG ATTCGTCTCG ATGCGCGCGA TTACGATGCG
CGTCTCGCCC AGGCGGATGC GGAGGTCGCG AGCGCTGAAG CGGCCGTGAC CGAGCTGGAA
GCGAAGAAAT CGCTGCAACT CGCGACCATC AACGAGCAGG GTGCCGAAGT GCGCGCGTCG
AATGCGGAGC TGACGCGAAG CGCGTCGGAT TCGGTGCGTT ATCGCCAACT GGTGAAGGAC
GATGCCGTCT CGAACCAGGT CGTCGAGCGC GCCGATGCCG ATCTCGCGAA AGCCCATGCA
TCGGTGGATC GCAGCAGCGC GGCGTTGACG GCCGCGCAGC GTCAACTTGC CGTGCTCGAT
GCGCAGATCA ACGATGCGCA CGCTCGCGTC GCAACGGCGT TGGCGGCCCA GCGTGTCGCC
GCGTTGAACG TCGAGTACAC GACGATCCGC GCACCCATCG ACGGTTATGT CGGCAATCGC
ACGGCGCGTG TCGGCGTGCT CGCGAATGTC GGCGTGTCGC TGCTGACGGT CGTGCCTGCG
AGCGGTCTGT GGATCGACGC GAACTTCAAG GAAGATCAGT TGAAGAAGAT GAAAGTCGGC
GACACCGTCG ATGTCGATCT GGACGCATCG AGCCGCCGCA TCGAAGGCGT GGTCGAGAGT
CTCGCGCCGG CGACGGGCGC AACCTTCAGC GTGCTGCCCG CCGAGAACGC CACCGGTAAC
TTCACGAAGA TCGTGCAGCG CGTGCCTGTG CGCGTGCGCC TTTCGGTGCC GAAGGACATG
CAGGGCGTGC TGCGCCCGGG TCTGTCGGCG ACGGTGAAAG TGCATTTGCG CGAGCATGAC
GCGCCCTCCG AAGCGGCCCG CGACTCTGCC CGCCCGGCTT CGTAA
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| Protein sequence | MSTTPSIAPS AVAGAAKQAR SIPWMLLAVI SVIVVIAAAT SYWFFVGRFV ETTDDAYVGG
DVTVLAPKVN GFVSDVLVQD NQYVTAGQVL IRLDARDYDA RLAQADAEVA SAEAAVTELE
AKKSLQLATI NEQGAEVRAS NAELTRSASD SVRYRQLVKD DAVSNQVVER ADADLAKAHA
SVDRSSAALT AAQRQLAVLD AQINDAHARV ATALAAQRVA ALNVEYTTIR APIDGYVGNR
TARVGVLANV GVSLLTVVPA SGLWIDANFK EDQLKKMKVG DTVDVDLDAS SRRIEGVVES
LAPATGATFS VLPAENATGN FTKIVQRVPV RVRLSVPKDM QGVLRPGLSA TVKVHLREHD
APSEAARDSA RPAS
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