| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4462 |
|---|
| Symbol | |
|---|
| ID | 6245983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1502461 |
|---|
| End bp | 1504362 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642596215 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001860622 |
|---|
| Protein GI | 186473280 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.906456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.226245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCCA ACCTGCTAGT CCAAATGGTC AACGGACTCG CCGACGCCTC GGCGCTCTTC
CTCGTCGCGG CAGGACTGTC GCTGATCTTC GGCGTCACTC GCATCGTCAA CTTCGCGCAC
GGCTCGTTCT ACATGCTAGG CGTCTACGTC GCCTACACCA TCACAAGCCG CTTCGGCGCA
ACGACGGTCG GCTTCTGGCT CTCGGTGATA GCCTCCGCGC TGACAATCGG CGCACTCGGC
GCGCTCGTCG AATGCATCGT GCTACGCCGT ATCTACAAAG CTCCCGAACT CTTCCACCTG
CTTGCAACCT TCGCCCTGGT ACTCATCTTC CGCGACACCG CGCTCGCGAT CTGGGGCCCG
CAAGACCTGT TCGGCCCGCG CGCCCCGCAC CTCGCAGGTG CAGTCGAGCT GCTCGGCCAT
CAACTCCCGA CCTACGACAT CGCTCTCATC GTCATCGGCC CGCTGGTTCT GCTCGCGCTC
TGGTACGCGC TGAGCCATAC CCGCTGGGGC ACACTGGTCC GCGCCGCGAC ATCCGACCGC
GAGATGCTCG GCGCGCTCGG CATCAACCAG GCGTGGCTGT TCACGGGCGC GTTCTTCGTC
GGCGCATTTC TCGCGGGACT GGGCGGCGCG CTGCAAGGCC CGCGCATGTC AGCGAATCTT
TCGCTCGACC TCGAGACCAT TGGCAATGCA TTCGTCGTGG TCGTGGTTGG CGGGATGGGC
TCGATTCCGG GCGCGTTCGT CGCCGCGCTG CTGATCGCGG AAATCAAGGC GCTGTGCATC
GGTATCGGAC ACGTGTCGCT GTTCGGCATC GGCCTGTCCC TGAGCCGCTT CACGCTCGTC
GCTGAATTTG TCGTGATGGC CGTCGTGCTC GTCGTGCGGC CGTGGGGCCT GCTCGGGCGT
CCGAGCTCGG CCGTGCGCGC AACCACCGCC CCCGAAGCGC CATTGAAGCC CGCAGGCAAA
CCCCTCAAAG TGCTCGCCGC CTGCGTGCTC GCCGCGCTCG TCGCCGCACC GCTCATGGCG
AACGCGTTTC CCTATATGCC CGTCCTGCTC GTCGAAATCC TTATCGCCGT TCTGTTTGCC
GCGAGCCTGC ACTTCATCAT GGGACCCGGC GGCATGCACT CGTTCGGTCA CGCCGCGTAC
TTCGGCCTCG GCGCATACGG TGCGGCGCTC TTTCTGAAAG TGCTCGAACT GCCGATGGAA
GCGGCGCTCG TGCTCGGGCC GGTGCTCGCC ATACTCGGTG CGCTGCTGTT CGGCTGGTTC
TGTGTGCGGC TATCGGGCGT GTATCTGGCC ATGCTGACGC TCGCGTTCGC ACAGATCGTG
TGGTCGGTCG TGTATCAATG GGACGATGTG ACGGGCGGCA GCAATGGCAT TCTCGGTCTA
TGGCCGTCGA GCTGGCTGTC GTCGCCCGTC GCGTACTACT ACGTGACGCT CGCCTTCGCC
GTGCCCGGCG TGTGGCTGCT GCGCCGCATG CTGTTCTCGC CGCTCGGCTA TGCAATGCGC
GCGTCGCGCG ATTCGGCGTT GCGCGCCGAA GCGATCGGCA TCGATACGAA GCGCGTGCAA
TGGGTCGCGT TCGTGATCGC ATCGCTGTTC TGCGGTCTCG CCGGCTCGCT GTACGCCTTT
TCCAAGGGCA CCATTTCGCC CGAAGTGATC AGCGTGAGCC GTTCCGTCGA CGGCCTCGTG
ATGGTGCTGC TCGGCGGCAT CCAGACCTTG ACGGGGCCTG TCGTGGGCGC GGCGCTGCTC
ACCTGGCTGC AGGATGCCGT TGCACGGCAG ACGGACTACT GGCAGGCCCT GCTCGGCGCC
GCGATCCTGC TGCTGGTGGT CGCGTTTCCG CAGGGTATCG TCGGTTTCGT GCGCGGACGT
TTCGAGCGTG ACGACACGCG GGCAGAAGGA GGCACGCGAT GA
|
|---|
| Protein sequence | MLPNLLVQMV NGLADASALF LVAAGLSLIF GVTRIVNFAH GSFYMLGVYV AYTITSRFGA
TTVGFWLSVI ASALTIGALG ALVECIVLRR IYKAPELFHL LATFALVLIF RDTALAIWGP
QDLFGPRAPH LAGAVELLGH QLPTYDIALI VIGPLVLLAL WYALSHTRWG TLVRAATSDR
EMLGALGINQ AWLFTGAFFV GAFLAGLGGA LQGPRMSANL SLDLETIGNA FVVVVVGGMG
SIPGAFVAAL LIAEIKALCI GIGHVSLFGI GLSLSRFTLV AEFVVMAVVL VVRPWGLLGR
PSSAVRATTA PEAPLKPAGK PLKVLAACVL AALVAAPLMA NAFPYMPVLL VEILIAVLFA
ASLHFIMGPG GMHSFGHAAY FGLGAYGAAL FLKVLELPME AALVLGPVLA ILGALLFGWF
CVRLSGVYLA MLTLAFAQIV WSVVYQWDDV TGGSNGILGL WPSSWLSSPV AYYYVTLAFA
VPGVWLLRRM LFSPLGYAMR ASRDSALRAE AIGIDTKRVQ WVAFVIASLF CGLAGSLYAF
SKGTISPEVI SVSRSVDGLV MVLLGGIQTL TGPVVGAALL TWLQDAVARQ TDYWQALLGA
AILLLVVAFP QGIVGFVRGR FERDDTRAEG GTR
|
|---|
| |