| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4457 |
|---|
| Symbol | |
|---|
| ID | 6245978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1498154 |
|---|
| End bp | 1498855 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642596210 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_001860617 |
|---|
| Protein GI | 186473275 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.33812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACA AGATTTTCGA GTCACTCCAC TCGGCAGTTG CCGACGTGCA TGACGGCGCG
ACCGTCATGA TCGGCGGCTT TGGCACGGCG GGCATGCCGT CCGAGCTGAT CGACGCGCTT
ATCGAGCAGG GCGCCAAAGA ACTCACCATC GTGAACAACA ACGCCGGCAA CGGCGACACG
GGCCTCGCCG CGTTGCTGAA GGCGAAGCGC GTTCGCAAGA TCATCTGCTC GTTCCCGCGC
CAGACGGACT CGTATGTGTT CGACGCGCTC TATCGCGCCG GCGAAATCGA ACTGGAACTC
GTGCCGCAGG GCAATCTGGC CGAGCGCATC CGTGCGGCGG GCGCGGGCAT CGGCGGCTTC
TTCACGCCGA CGGGTTACGG CACCAAACTC GCGGAAGGCA AAGAAACGCG TGAGATCGAC
GGCAAGCATT ACGTGCTGGA AGCACCGCTG CACGCCGATT TCGCGCTGAT CAAGGCGTAC
AGGGGCGACC GCTGGGGCAA CCTGGTGTAT CGCAAGACGG CGCGCAATTT CGGCCCGATC
ATGGCGAGCG CCGCGAAGAC GGCCATCGTG CAGGTGTCGG AAGTGGTGCC GCTCGGCGCG
CTCGACCCCG AAGTGATCGT GACGCCGGGC ATTTTCGTGC AACGCATCGT CGAAGTGCCC
CAAGCGGCGC ATCAAACGCA ACGCCCTGAA CAAGCCGCCT GA
|
|---|
| Protein sequence | MINKIFESLH SAVADVHDGA TVMIGGFGTA GMPSELIDAL IEQGAKELTI VNNNAGNGDT
GLAALLKAKR VRKIICSFPR QTDSYVFDAL YRAGEIELEL VPQGNLAERI RAAGAGIGGF
FTPTGYGTKL AEGKETREID GKHYVLEAPL HADFALIKAY RGDRWGNLVY RKTARNFGPI
MASAAKTAIV QVSEVVPLGA LDPEVIVTPG IFVQRIVEVP QAAHQTQRPE QAA
|
|---|
| |