| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4424 |
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| Symbol | |
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| ID | 6245945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1463261 |
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| End bp | 1464580 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642596177 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_001860584 |
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| Protein GI | 186473242 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.250365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCT CTGCCAGTAA GCCCCTGCTC GGTTGTATTG CCGACGACTT CACGGGCGCG
ACGGATCTCG CGAACATGCT GGTGCGCGGC GGCATGCGCA CCGTTCAGAC CATCGGCGTG
CCTGCTGCCG ACACGCGTGT TGAAGCCGAC GCGCTGGTGG TTGCGCTAAA GTCGCGCACC
ATCGACGCAG CCGATGCCGT CGCGCAATCG CTCGCAGCGC TCGAATGGCT GCGTGCGCAA
GGCTGCCGCC AGTTTTTCTT CAAGTACTGT TCGACCTTCG ATTCGACCGA CAAGGGCAAC
ATCGGCCCCG TTGCCGATGC GCTGCTCGAT GCGCTGTCGC CGATCGGCGG CGGCACGCCC
TTCACGATCG CCTGTCCGGC GTTTCCGGAG AACGGGCGCA CGATCTATCG CGGGCATCTG
TTCGTCGGCG ATGTGCTGTT GAACGAGTCG GGCATGGAGC ATCATCCGCT TACGCCGATG
ACGGACGCTA ACCTCGTGCG CGTGCTGCAA CGGCAGACGC GCTCGACCGT CGGTCTCGTG
CGTTACGACG CGGTTGCGCG CGGAGCCGAA GCCGTGCGCG CGTCGATCGA TGCATTGCGT
CACGACGGCG TGCGCATGGC GATCGCCGAT GCCGTGTCGG ATGCCGATCT CTACACGCTC
GGCGAAGCGT GCGCGGACTT GCCGTTGATC ACGGGCGGCT CTGGCGTCGC GCTTGGCTTG
CCGGCCAATT TCCGTCGCGC CGGTTTGCTC GGCGATGCAG CAGCCGACGC AGGCGAGTTG
CCGCGCATCG AAGGCGCGTC GGCGGTGCTG GCGGGCAGCG CATCGAAGGC AACCAATGCG
CAGGTGGCCG CGTGGCGCGA AACGCGGCCC GCGTTCCGCA TCGATCCATT GGCAGCGGCG
CGCGGCGAGC CGGTCGTCGA ACAGGCGCTC TCCTTTGCGC GCGAGCATAT GAACGCACGC
GAGAAGCAAC CGGTGCTGAT CTACGCAACG GCATCGCCGG ACGAAGTGAA GGCGACGCAG
CGCGAACTCG GCGTCGCGCA AGCCGGGGAA CTCGTCGAAC GCACGCTGGC TGCAATTGCG
CGCGGGCTGC ATCAGATGGG CGTGCGCAAA TTCGTCGTAG CGGGCGGCGA GACGTCGGGC
GCGGTCGTGC AGGCGCTCGA TGTACGAATG CTGCGCATCG GCAAGCAGAT CGATCCCGGC
GTCCCTGCCA CCGCGACCAT TGGTGCGGAG CCGCTCGCGC TCGCACTCAA GTCTGGCAAT
TTCGGGGCCG TCGATTTCCT GGAGAAGGCG CTGCGTCATC TCGACGGAGG CACGCAATGA
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| Protein sequence | MTTSASKPLL GCIADDFTGA TDLANMLVRG GMRTVQTIGV PAADTRVEAD ALVVALKSRT
IDAADAVAQS LAALEWLRAQ GCRQFFFKYC STFDSTDKGN IGPVADALLD ALSPIGGGTP
FTIACPAFPE NGRTIYRGHL FVGDVLLNES GMEHHPLTPM TDANLVRVLQ RQTRSTVGLV
RYDAVARGAE AVRASIDALR HDGVRMAIAD AVSDADLYTL GEACADLPLI TGGSGVALGL
PANFRRAGLL GDAAADAGEL PRIEGASAVL AGSASKATNA QVAAWRETRP AFRIDPLAAA
RGEPVVEQAL SFAREHMNAR EKQPVLIYAT ASPDEVKATQ RELGVAQAGE LVERTLAAIA
RGLHQMGVRK FVVAGGETSG AVVQALDVRM LRIGKQIDPG VPATATIGAE PLALALKSGN
FGAVDFLEKA LRHLDGGTQ
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