| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4419 |
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| Symbol | |
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| ID | 6245940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1455937 |
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| End bp | 1458684 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642596172 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001860579 |
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| Protein GI | 186473237 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.251272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAG AACAGAACCT GGATGGTAAG ACCCTGCTAT TGGTTGACGG TTCGAGTTAT
CTGTACCGGG CCTACCATGC GATGCCTGAT TTGCGCGGTC CCGATGGCGG GCCAACGGGG
GCGCTCTACG GGATCATCAA CATGCTGCGC CGTATGCGCA AGGAGGTTAC GGCAGAGTAT
AGCGCGTGCG TGTTCGATGC CAAAGGCAAG ACGTTTCGCG ACGACTGGTA TCCGCAATAC
AAGGCGAACC GTCCGTCGAT GCCCGACGAT CTCGCGAGAC AGATCGAGCC GATTCACGTC
GCCGTGCGCT CGCTCGGCTG GCCGCTCCTG ATGATCGACG GCGTCGAAGC CGACGACGTG
ATCGGCACGC TTGCGAAGCG CGCGGAAGCG CGCGGCATGA ACGTGATCGT ATCCACTGGG
GACAAGGATC TGGCGCAGCT CGTGACGGAT CATGTCACCC TCATCAATAC GATGACGAAC
GAGAAGCTCG ACCGCGAAGG CGTCGTGGCG AAGTTCGGCG TGCCGCCCGA GCGCATCGTC
GATTACCTGT CGCTGATCGG CGATACCGTC GACAACGTGC CCGGCGTGGA GAAATGCGGT
CCGAAAACGG CGATCAAATG GCTCACGCAA TTCGGCACCC TCGATGGCAT CGTCGCACAT
GCAGATGAAA TCAAAGGTGC GGTAGGAGAC AATCTGCGGC GCGCGCTCCA CTTTCTCCCT
ATGGCGAGAA AGCTCGTCAC GGTCGAAACG GATTGCGATC TGACGGAACA TGTGACCTCG
TTCGCGGATA CGCTCCCGAC GCGGCCCGAG TCGCGCGAAG AACTGCGCGA CGTGTTCACG
CGTCATGGCT TCAAGACGTG GCTGCGTGAA GTTGAAGTCG CCGATGCCGT CGAAGGCCCC
GAGACCGACG TGCCGCCCGC GCCCACCGTG GAAGGCGACG GCGCGCGCGA ATACGACACC
GTGCAGACCT GGGAACAGTT CGACGCGTGG CTCGAAAAAA TCGATCATGC CGAGATCACC
TCGTTCGATA CGGAAACGAC GTCGCTCGAT CCGATGGTCG CGCAGATCGT CGGCATTTCG
ATTGCCGTCG AAGCGGGCAA GGCTGCGTAT ATTCCCGTCG CGCATCACGG GCCGGATGCG
CCCGTCCAGT TGCCGCGCGA CGAAGTGCTC GCGAAGCTCA AGCCGTGGCT CGAAAGCCGC
GACAAAAAGA AGGTCGGCCA GCATCTGAAG TACGACGAGC AGGTACTCGC GAACTACGGC
ATTACGATGG ACGGCATCGA GCACGACACG CTGTTGCAGT CGTACGTGCT CGAGTCGCAT
CGTCCGCACG ACATGGACAA CCTCGCACTG CGTCATCTCG GTCTTAAGAC GATCAAGTAC
GAGGATGTGG CGGGCAAGGG CGCGTCGCAG ATAGGTTTCG ACGAAGTGGC GCTCGACAAG
GCTTCCGAAT ACGCAGCGGA AGATGCCGAC ATCACGTTGC GTTTGCATCA GACGCTGTAT
CCGCAGATCG CTTCCGAAGT GCCGCTCGAT CACGTGTACC GCAACATCGA AGTGCCGACG
TCGCGTGTGC TGCGCAAGAT GGAGCGCAAC GGCGTGCTGA TCGACGTCGA AAAGCTGCGC
GTGCAAAGCA ACGAGATCGC GACGCGTCTC GTCGAACTGG AGCGGCAGGC GTATGACCTC
GCGGGCGGCG AATTCAATCT CGGCTCGCCG AAGCAGATCG GCCAGATTTT CTTCGAGAAG
CTCGAACTGC CCGTCGTGAA GAAGACGCCG AGCGGCGCGC CTTCCACCGA CGAAGAGGTG
CTGCAAAAGC TTGCGGAAGA CTATCCGCTG CCGAAGACGA TCCTCGAGCA CCGCGGGCTG
TCGAAGCTGA AGTCGACCTA CACCGACAAG CTTCCGCGCA TGGTCAACGC GAGCACGGGC
CGCGTGCATA CGAACTATGC GCAGGCCGTC GCGGTGACGG GGCGCCTCGC ATCGAACGAT
CCGAATCTGC AGAACATTCC CGTGCGCACG GGCGAAGGCC GGCGCATTCG CGAGGCGTTC
ATCGCGCCGC CGGGACACAA GCTCGTGTCG GCCGACTACT CGCAGATCGA GTTGCGCATC
ATGGCGCACA TCTCCGGCGA CGAAGCGCTG TTGCGTGCGT TCAAGCAGGG CGAAGACATC
CACCGCGCCA CGGCTTCGGA AGTGTTCAGT GTGACGCCGC TCGAAGTGTC GAACGATCAG
CGGCGCATCG CGAAGGTGAT CAACTTCGGC CTGATCTATG GGATGAGTTC GTTCGGGCTC
GCGTCCAACC TGGGCATCAC GCGCGATGCG GCGAAGCTGT ATATCGACCG CTATTTCGCG
CGTTACCCGG GCGTGGCCGC ATACATGGAA AACACGCGCA CCAGCGCGAA AATGAAGGGC
TACGTCGAAA CGGTGTTCGG CCGCCGGCTG TGGCTGCCCG AGATCAACGG CGGCAACGGC
CCGCGCCGCC AGGCTGCGGA ACGTGCGGCG ATCAACGCGC CGATGCAGGG TACGGCCGCC
GACCTGATCA AGCTGTCGAT GATCGCGGTG CAGAAGTGGA TCGAAGAATC GGGAATCCGC
ACGCGCATGA TCATGCAGGT ACACGACGAG TTGGTTCTCG AAGTGCCGGA CGACGAACTC
TCCGACGTGC GCAAGCGCTT GCCGGAACTG ATGTGCGGTG TTGCGCAACT GAAGGTGCCG
CTTGTCGCCG AAGTGGGCGC AGGCGCGAAC TGGGAGGAAG CGCACTGA
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| Protein sequence | MPEEQNLDGK TLLLVDGSSY LYRAYHAMPD LRGPDGGPTG ALYGIINMLR RMRKEVTAEY
SACVFDAKGK TFRDDWYPQY KANRPSMPDD LARQIEPIHV AVRSLGWPLL MIDGVEADDV
IGTLAKRAEA RGMNVIVSTG DKDLAQLVTD HVTLINTMTN EKLDREGVVA KFGVPPERIV
DYLSLIGDTV DNVPGVEKCG PKTAIKWLTQ FGTLDGIVAH ADEIKGAVGD NLRRALHFLP
MARKLVTVET DCDLTEHVTS FADTLPTRPE SREELRDVFT RHGFKTWLRE VEVADAVEGP
ETDVPPAPTV EGDGAREYDT VQTWEQFDAW LEKIDHAEIT SFDTETTSLD PMVAQIVGIS
IAVEAGKAAY IPVAHHGPDA PVQLPRDEVL AKLKPWLESR DKKKVGQHLK YDEQVLANYG
ITMDGIEHDT LLQSYVLESH RPHDMDNLAL RHLGLKTIKY EDVAGKGASQ IGFDEVALDK
ASEYAAEDAD ITLRLHQTLY PQIASEVPLD HVYRNIEVPT SRVLRKMERN GVLIDVEKLR
VQSNEIATRL VELERQAYDL AGGEFNLGSP KQIGQIFFEK LELPVVKKTP SGAPSTDEEV
LQKLAEDYPL PKTILEHRGL SKLKSTYTDK LPRMVNASTG RVHTNYAQAV AVTGRLASND
PNLQNIPVRT GEGRRIREAF IAPPGHKLVS ADYSQIELRI MAHISGDEAL LRAFKQGEDI
HRATASEVFS VTPLEVSNDQ RRIAKVINFG LIYGMSSFGL ASNLGITRDA AKLYIDRYFA
RYPGVAAYME NTRTSAKMKG YVETVFGRRL WLPEINGGNG PRRQAAERAA INAPMQGTAA
DLIKLSMIAV QKWIEESGIR TRMIMQVHDE LVLEVPDDEL SDVRKRLPEL MCGVAQLKVP
LVAEVGAGAN WEEAH
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