Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4390 |
Symbol | |
ID | 6245912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1423056 |
End bp | 1425269 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642596144 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_001860551 |
Protein GI | 186473209 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.497261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACG TACTTCCTGA CCGTCTGTTG CCGGGCAATC CCTACCCGCT GGGTTCGAGC TGGGACGGAC TGGGCGTGAA CTTCGCCGTG TTCTCGGCGA ACGCTCAACG TATCGAGCTC TGCCTCTTCG AGCCGACAGG CAGAAAAGAA CTGAAGCGCT ATGCGCTTCC CGAATGCACC GACGAAGTCT GGCACGGCTA CCTGCCGCAC GCACACCCCG GCACGGTCTA CGCCTTCAGG GCGCACGGCC CGTACCAACC GCAACACGGG CATCGCTTCA ATCCGCACAA GCTGTTGCTC GACCCGTACG CACGCAAGCT CGTCGGCCAG TTTCGATGGT CCGATGCGCT GTTCAGCTAT CGCGTGCATT CGAACAGAAT GGATCTCTCG ATCGACCGAC GCGACTCGGC GCCCGCCATG CCCAAATGCG TCGTCGTCGA CGAAGCGTTC GACTGGTCGC ACGACACACG CCCCAACGTG CCGTGGAGCG AAACCGTCAT CTACGAGACC CACGTGCGCG GTGCATCGAT GTTGCGCAAG GATCTCCGCG CGCCCGAACG CGGCACGTTC GCCGCACTCG CATCGCCGGA ATTCATCGAA CATCTGCTGA AGCTCGGCGT CACGGCCGTC GAACTGCTGC CCGTGCACGC ATTCCTGAAC GACCGCTTCC TCGTCGAGCG CGGGCTGCGC AACTACTGGG GCTACAACAC GGCCGCGTTC TTTGCGCCCG AGCCGTCGTA TCTGTCGGCA CACCGGCTCG ATGAAATGCG CATCGCCGTC CGTCAACTGC ACGCGGCGGG AATCGAGGTG ATACTCGACG TCGTCTACAA CCACACATGC GAAGGCAATG AAATGGGCCC TACCGTGTCG TGGCGAGGAC TCGACAACGC CAGCTATTAC CGCCTCATCC CAGGCGACGA GCGCCATCAC ATCAACGACA CGGGCTGCGG CAACACCCTC AACCTGCCCC ATCCGCGCGT GCTGCAAATG GTGATGGACT CGCTGCGCTA CTGGTCGACG GCTTTCAATA TCGACGGCTT CCGTTTCGAT CTCGGCGTCA CGCTCGGCCG CGAGCATTCG GGTTTCGATC CCGGTTCGGG CTTCTTCGAC GCGCTCCGGC AAGACCCCAT CCTGTCGCAA CGCAAGCTGA TCTCCGAACC GTGGGACATC GGGCCGGGCG GCTATCAGCT CGGCAATCAT CCGCCCGGCG TGAGCGAATG GAACGACCGT TTCCGCGACT CCGTGCGGCG CTTCTGGCGC GGCGACGCCG GCATGCGTCC CGATCTCGCC GCGCGCCTGA CGGGATCGGC GGATCTGTTC AACCGGCGTT TTCGCAAGCC GACGGCGTCG ATCAACTTCG TCACGTCGCA CGACGGCTTC ACGCTCGCCG ATCTCGTGTC GTACTCGCAC AAGCACAACG AGGCCAACAA CGAAAACAAC AACGACGGGC ACAACGAGAA CTTCGGCTCG AACTGGGGCG TCGAAGGTCC CACCGATGAG CCCGCCATCG CCGAAACGCG AGAGCGTGTG TCCCGTTCGC TGATCGCGAC GCTGTTCGTC GCGCTCGGCA CGCCGATGAT GCTCGCCGGC GACGAAATGG GCCGCACGCA GCGCGGCAAC AACAACGCGT ACTGCCAGGA TAACGAAATT TCCTGGATAG ATTGGGAACG TGCCGCCCTC CCACACGGGC GCAAAATGAC TATGTTTTTC GCGCGCATCA TCGCGTTGCG AAAGCTGCAT CCGCTGCTGC GCGAAAACCG CTTCCTGTTT GGCGATCGCG AAGTATTGCC CGGGCTCTAT GACGTCGGGT GGTTCGACGA GCACGGCGAA GCGCTGACCA TCGAAGCATG GCAGGACCCG GAAGGCCGAG CGTTCACGCT GCGGCGCGCA GGCGCGGGGC TGAACGGAGA AACGGAAGTA TTGTTGATGA TGTTGAACGC AGCCGCGACG GCTGTGCGTT TCACGCCGCC TCCGCCGCAC CTGGAATGGC ATGTGCTGCT GGATACGGCG GACCCCGAGG CGCCGCCCGC GCCGCTCGCC ACGCCCGATC TGGAAGTGGC CGCGCACAGC ATGGTCGTGC TCGCTGCGCA GCCCACGGGC GACGCGGACT GGCAGGCGAG CTGGCGCGCG GGCGCGCAGT ACGGTCCGCG TCTGTTGACG GCGCTGCCGC CGGACCCGGG CACGTCGATG CCGGAACCGG AACAGTCCGG CTAG
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Protein sequence | MSHVLPDRLL PGNPYPLGSS WDGLGVNFAV FSANAQRIEL CLFEPTGRKE LKRYALPECT DEVWHGYLPH AHPGTVYAFR AHGPYQPQHG HRFNPHKLLL DPYARKLVGQ FRWSDALFSY RVHSNRMDLS IDRRDSAPAM PKCVVVDEAF DWSHDTRPNV PWSETVIYET HVRGASMLRK DLRAPERGTF AALASPEFIE HLLKLGVTAV ELLPVHAFLN DRFLVERGLR NYWGYNTAAF FAPEPSYLSA HRLDEMRIAV RQLHAAGIEV ILDVVYNHTC EGNEMGPTVS WRGLDNASYY RLIPGDERHH INDTGCGNTL NLPHPRVLQM VMDSLRYWST AFNIDGFRFD LGVTLGREHS GFDPGSGFFD ALRQDPILSQ RKLISEPWDI GPGGYQLGNH PPGVSEWNDR FRDSVRRFWR GDAGMRPDLA ARLTGSADLF NRRFRKPTAS INFVTSHDGF TLADLVSYSH KHNEANNENN NDGHNENFGS NWGVEGPTDE PAIAETRERV SRSLIATLFV ALGTPMMLAG DEMGRTQRGN NNAYCQDNEI SWIDWERAAL PHGRKMTMFF ARIIALRKLH PLLRENRFLF GDREVLPGLY DVGWFDEHGE ALTIEAWQDP EGRAFTLRRA GAGLNGETEV LLMMLNAAAT AVRFTPPPPH LEWHVLLDTA DPEAPPAPLA TPDLEVAAHS MVVLAAQPTG DADWQASWRA GAQYGPRLLT ALPPDPGTSM PEPEQSG
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