Gene Bphy_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4389 
Symbol 
ID6245911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1421059 
End bp1422969 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content66% 
IMG OID642596143 
Productmalto-oligosyltrehalose trehalohydrolase 
Protein accessionYP_001860550 
Protein GI186473208 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR02402] malto-oligosyltrehalose trehalohydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.452822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAC GTCCGATCGA CCCTCACGCG CATCATTACG CGCACTGCCT GCCGTTCGGC 
GCGCAACTGC TCGGTGCGAC GGGCGCGAAG CCGCGCACGC GCTTCCGGCT GTGGGCGCCT
TCGTGCGCAA AGGTGCAGCT CGCCGTCGAA AGCGGCCAGG GCGAGCAGGC CTCGGGCACG
CACGATATGA GCCCGACGGG CAACGGCTGG TTCGAGGCCG AAATCGACTG TAGCGCGGGC
ACGCTGTATC GGTACAAGCT CGACGGCGCG CTGCTGATCC CCGACCCCGC GTCGCGCTTC
CAGCCGCAAG ACGTGCACGG ACCCAGCGAA GTGATCGATC CGCGCGCATA CGCGTGGCAG
CACACGAACT GGTGCGGCCG CCCGTGGGAA GAAACGGTGC TGTACGAGCT GCATGTCGGC
GCGCTGGGCG GCTATGCCGG CGTGATGAAG CGCCTGCCCG CGATCGCCGC GCTCGGCGTC
ACCGCGATCG AACTGATGCC GCTCAACGAT TTCTCCGGCA CGCGCAACTG GGGCTACGAC
GGTGTGCTGC CGTATGCGCC CGACTCCGCA TATGGGCGCC CCGACGAACT GAAAGCGCTG
ATCGACGCCG CGCACGGTCA CGGTCTAGCC GTGTTTCTCG ATGTCGTCTA CAACCACTTC
GGCCCGGACG GCAATTATCT CCAGCAGTAC GCAAAGCCGT TCTTCCGCGA GGGCACGCAC
ACGCCGTGGG GCCCCGCCAT CGACTTCGCA CGCAGCGAAG TGAGCGAGTT CTTCTGCGAC
AACGCGCTGT ACTGGCTGAA CGAATATCGC TTCGACGGCC TGCGCCTCGA CGCCGTGCAT
GCGATCGACA ACGACGACTG GCTGCGCAGT TTTTCCGATC ACGTGCGCGC GCATGTGCAA
CATGGCCGCC ATGTGCATCT CGTGCTGGAA AACGAGCGCA ATACGGCGAG CCTGCTCGAC
ACGCATTTCA CCGCGCAATG GAACGACGAC GGGCACAACA CGCTGCACGT GCTGCTGACG
GGCGAACACG AAGGCTATTA CGCCGCCTAC GCCGACCGGC CGATACAGAA GCTCGCGAGA
ATTCTGGGCA GCGGTTTCGG CTATCAGGGC GACCCTTCGC CGATTCACGA CGGCAAGCCG
CGCGGCCAGC CCAGCGGCCA TCTGCCGCCC GCTTCGTTCG TGCTGTTTCT GCAAAACCAC
GACCAGGTCG GCAATCGCGC AATGGGTGAG CGTCTGCGCT CGCTTTGCTC CGACGACGCG
CTGCGCGCCG CGACGGGCCT GTTGCTGCTG TCGCCGCAAA TACCGCTGCT GTTCATGGAC
GAAGAGTACG GCTCGACACA GCCGTTCCTG TTCTTCACCG ACTACACCGG CGATCTCGCG
GATGCCGTGC GCGAAGGGCG CCGCAAAGAG TTCGCACGCT TTTCCGCGTT TGCCGACGAA
AAGCGCCGCG CGCTGATCCC CGATCCAAAC GATCGGCAGA CGCTCGCCAT ATCGTCGCCC
GTCGAACGTC GCGGCGATTC GCCCGAGCAC AAGGATGCGC TCGACTGGAT GCATTTCTAC
AAGTCCGCGC TCGCCGTGCG CGCCAAGCTG ATCGCGCCGC GTCTAAAGCA CGCGAGGCCG
CTTGGCGCGA CCGTGCTCGA GGCTTCTGGC GCACGCGAAG CGGACGCGCT CGTCGCGCGC
TGGAAGCTCG CCGACGGCGA GACGCTGTCG ATCGCACTGA ATCTCGGCAA GGACGCCGTG
CGGCTCGACG AGTGTCCCGC AGGCAAGGTG ATCTTCGAAA CGCCGCCGCG CGTGCGCGAT
CGCGTCGACG CGGGCGAGTT GCCGTCGAAC GCATTCGTCG CGTGGCTGAC GGGCGACGTC
AGCCAATACG CGGTCGGCCA TGACGCGCGC AAGCACGTTC AAGAGGAGTG A
 
Protein sequence
MHERPIDPHA HHYAHCLPFG AQLLGATGAK PRTRFRLWAP SCAKVQLAVE SGQGEQASGT 
HDMSPTGNGW FEAEIDCSAG TLYRYKLDGA LLIPDPASRF QPQDVHGPSE VIDPRAYAWQ
HTNWCGRPWE ETVLYELHVG ALGGYAGVMK RLPAIAALGV TAIELMPLND FSGTRNWGYD
GVLPYAPDSA YGRPDELKAL IDAAHGHGLA VFLDVVYNHF GPDGNYLQQY AKPFFREGTH
TPWGPAIDFA RSEVSEFFCD NALYWLNEYR FDGLRLDAVH AIDNDDWLRS FSDHVRAHVQ
HGRHVHLVLE NERNTASLLD THFTAQWNDD GHNTLHVLLT GEHEGYYAAY ADRPIQKLAR
ILGSGFGYQG DPSPIHDGKP RGQPSGHLPP ASFVLFLQNH DQVGNRAMGE RLRSLCSDDA
LRAATGLLLL SPQIPLLFMD EEYGSTQPFL FFTDYTGDLA DAVREGRRKE FARFSAFADE
KRRALIPDPN DRQTLAISSP VERRGDSPEH KDALDWMHFY KSALAVRAKL IAPRLKHARP
LGATVLEASG AREADALVAR WKLADGETLS IALNLGKDAV RLDECPAGKV IFETPPRVRD
RVDAGELPSN AFVAWLTGDV SQYAVGHDAR KHVQEE