| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4356 |
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| Symbol | prpB |
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| ID | 6245878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1383713 |
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| End bp | 1384624 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642596110 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001860517 |
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| Protein GI | 186473175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACTG CACATACATC GGCGGGCGCC GCGTTCCGCG CAGCCGTCGC CGCCGAAAAG
CCGCTGCAGG TGGTCGGCGC GATCAACGCG AATCACGCGC TGCTCGCCCA GCGCGCGGGC
TTCAAGGCGA TCTACGTGTC GGGCGGCGGC GTCGCGGCAG GCTCACTCGG TTTGCCCGAT
CTCGGTATTT CGACGCTCGA CGACGTGCTG ACCGACGTGC GCCGCATCAC CGACGTCTGC
GATCTGCCGC TGCTGGTCGA TGTGGACACG GGCTTCGGTC CGTCGGCGTT CAACATCGCG
CGCACGGTGA AAGCGCTCAC GAAAGCCGGC GCGGGCGCCA TGCATATCGA AGACCAGGTC
GGCGCGAAGC GCTGCGGACA TCGGCCGGGC AAGGCGATCG TGTCGCAGGG CGAGATGGTC
GACCGCATCA AGGCCGCCGT CGACGCCCGC ACCGATCCCG ATTTCGTCAT CATGGCGCGC
ACGGACGCGC TTGCCGTCGA AGGCCTGCAA TCGGCGATCG ACCGCGCGAT GGCCTGCGTC
GAAGCAGGCG CCGACATGAT CTTCCCCGAA GCGATGACAG AACTCCCGAT GTACCGGCAG
TTCGCGCAGG CCGTGAAGGT GCCCGTGCTC GCCAACATCA CCGAGTTTGG CGCGACGCCG
CTGTTCACCG TCGAAGAACT GCGCGGCGCG GATGTATCGC TGGTGCTGTA TCCGCTGTCG
GCGTTCCGCG CGATGAACCG GGCCGCGGAA AACGTCTATT CGGCGATCCG CCGCGACGGC
ACGCAAAAGG CCGTCGTCGA CACGATGCAG ACCCGGGAAG AACTGTACGA TCGCATCGGC
TATCACGCGT ACGAGCAAAA ACTCGACGCG CTTTTCAGCC AGGGCGCGAA AAACGACAAG
CAAGACAAAT GA
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| Protein sequence | MSTAHTSAGA AFRAAVAAEK PLQVVGAINA NHALLAQRAG FKAIYVSGGG VAAGSLGLPD
LGISTLDDVL TDVRRITDVC DLPLLVDVDT GFGPSAFNIA RTVKALTKAG AGAMHIEDQV
GAKRCGHRPG KAIVSQGEMV DRIKAAVDAR TDPDFVIMAR TDALAVEGLQ SAIDRAMACV
EAGADMIFPE AMTELPMYRQ FAQAVKVPVL ANITEFGATP LFTVEELRGA DVSLVLYPLS
AFRAMNRAAE NVYSAIRRDG TQKAVVDTMQ TREELYDRIG YHAYEQKLDA LFSQGAKNDK
QDK
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