| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4353 |
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| Symbol | prpD |
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| ID | 6245875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1380442 |
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| End bp | 1381893 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642596107 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_001860514 |
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| Protein GI | 186473172 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CGATCTCCAA TGTCCGGCCC GCTCCGGACA CAGTGCTGGT CGATATCGTC
GACTACGTGC TGAATCACAG GCTCGAGAGC GATGTCGCGC TGGAGACGGC GCGCAACTGC
CTGATCGATA CGCTCGGTTG CGGACTCGAG GCCTTGTCCT ACCCTGCCTG CACCAAGCTG
ATGGGACCGA TCGTGCAGGG CACGATCGTC CCGAACGGCG CCAGGGTGCC GGGCACGTCG
TTCCAGCTGG ATCCCGTGCA AGCCGCGTTC AACATCGGCG CGATGATCCG CTGGCTCGAC
TTCAACGACA CCTGGCTCGC AGCCGAATGG GGCCATCCGT CGGACAACCT CGGCGGTATT
CTCGCGACGG CCGACTGGCT CTCGCGCACC GCCGTCGCCA ACGGCAGGAA GCCGCTGGTC
ATGAAAGACG TCCTGATCGG CATGATCAAG GCGCACGAAA TTCAAGGCTG CATCGCGCTC
GAAAACTCGT TCAACAAGGT CGGCCTGGAC CATGTGCTGC TCGTGAAGCT GGCGTCAACG
GCCGTCGTCG GGCAGATGCT CGGCCTGACG CGCGATGAGC TGATTAACGC AGTCTCGCAA
GCGTTTGTCG ATGGACATGC GCTGCGCACC TACCGCCATG CGCCGAACAC GGGCTCGCGC
AAGTCCTGGG CAGCCGGCGA TGCAACATCG CGCGCGGTGC GTCTCGCGCT GATCGCGAAG
ACGGGAGAAA TGGGCTACCC GTCGGTGCTG ACGGCGAAGA CGTGGGGCTT CTACGACGTG
CTGTTCAAAG GACAGCCGTT CCGCTTCCAG CGGCCGTACG GTTCGTATGT GATGGAAAAC
GTGCTGTTCA AGATCTCGTT TCCCGCTGAA TTCCACGCGC AGACGGCTGC CGAAGCGGCG
ATGACGCTGC ACGAACAGCT GCGCGAGAGC GGCAAGCGCG TCGAAGACAT CGCGAAGATC
ACCATCCGCA CGCACGAAGC CGCCATCCGC ATCATCGACA AGAAAGGCCC GTTGAACAAT
CCCGCCGACC GCGATCACTG CATCCAGTAC ATGATCGCCG TGCCGCTGAT TTTCGGGCGC
CTCACTGCGG CGGATTACGA AGACGAGGTC GCGCGCGATC CGCGCATCGA CTCGTTGCGC
GCGAAGATGC AATGCGTGGA AGACCCGCAA TTCACGAAGG ACTATTACGA TCCGGACAAG
CGCTCGATAG CCAATGCGCT GACGGTCGAG TTCGCCGACG GTTCGACGTT CGACGAAGTG
GTTGTCGAGT ATCCGCTCGG TCACATGCGT CGCCGCGCCG AGGGCATCCC GCTGCTGGTG
GAGAAGTTCA GGACGAATCT CGCGCGGCGC TTTCCGGCAA AGCAGCAACA GGCGATTCTC
GATGTGTCGC TGGACCGGGC AAAGCTGGAA GCGATGCCGG TCAATGAATA CGTCGATCTG
TACGTTATTT GA
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| Protein sequence | MSAPISNVRP APDTVLVDIV DYVLNHRLES DVALETARNC LIDTLGCGLE ALSYPACTKL
MGPIVQGTIV PNGARVPGTS FQLDPVQAAF NIGAMIRWLD FNDTWLAAEW GHPSDNLGGI
LATADWLSRT AVANGRKPLV MKDVLIGMIK AHEIQGCIAL ENSFNKVGLD HVLLVKLAST
AVVGQMLGLT RDELINAVSQ AFVDGHALRT YRHAPNTGSR KSWAAGDATS RAVRLALIAK
TGEMGYPSVL TAKTWGFYDV LFKGQPFRFQ RPYGSYVMEN VLFKISFPAE FHAQTAAEAA
MTLHEQLRES GKRVEDIAKI TIRTHEAAIR IIDKKGPLNN PADRDHCIQY MIAVPLIFGR
LTAADYEDEV ARDPRIDSLR AKMQCVEDPQ FTKDYYDPDK RSIANALTVE FADGSTFDEV
VVEYPLGHMR RRAEGIPLLV EKFRTNLARR FPAKQQQAIL DVSLDRAKLE AMPVNEYVDL
YVI
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