Gene Bphy_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4345 
Symbol 
ID6245867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1371093 
End bp1372448 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content64% 
IMG OID642596099 
Producttype II and III secretion system protein 
Protein accessionYP_001860506 
Protein GI186473164 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.222675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG GTATCTACCC GAACGCGCTG CGATGCTTCG CAAGTGCCGC ACTCTTCATG 
GGCGTGCTCG CCGCCGGTGC GAGCGCTGCG GATGCGACCA GCGCGCAACG CGGCGTCGAC
GCAGACGCCG CGCAAAACGC CGCCGTGCTG GATTTGTACA AGGGCGAAGT GCGCATGCTC
AACGTGCCTG GCACGATCAA ACGCATCGCG ATCGGCAACG GCAAGCTCCT GACGGCGAAT
GTCGTCGACG GGCGCGTGAT GCTGCTCGCC GAAAGCGCGG GCATCACGTC GCTCGTCGTG
TGGAACGAGC GCGGCGTCGC GCTGCAGACG ACGGTGCGGG TCGCCAAAGG CGACGTCGGC
ATGTCGGCGG CGCAGTTGCG CAGCGTGCTG GCGGCGGTGC CGGGCGTGCG CGTGCAGGAA
GTGGGGCCGA ACATCGTGTT GGCGGGCAGC GTGCATCGCG AAAAGGCGGC CGCAGTGAAA
GCCGCGATCG CCGATATGAC GAACGTGATC GACACCACCA CGATCGACGA AGGCGATGCG
CTGAAGAAAA CCCTGCATTT CAAGGTGCAG ATCATGGAAG TGACGCGCAC CGGGCAGAAG
GACATTGGCA TTGCGTGGGA CAGCCAGTTC GCGGGACCGC AGGTGTCGGG ACAAGGCTTC
ATCGGCTCCG GTGCGGCAAG CGGCGCAAAC TTCTTTCTTG CAGGAATCGC ATCGACCATC
ACTTCGCGCA TCAATTTCGC GATCAACAAC GGTGACGCGT TCATCCTCGC CGCGCCCGAA
CTGAATACGA AGAGCGGCGG CACGGCATCG TTTCTCGCGG GCGGCGAAGT GCCGATTCCA
AAGGCGGGTG CGCTCGGCAC GACCGACGTC GAATACAAGC CGTACGGCAT CCGGTTGAAC
ATCAGGCCCG TCGTCGATGC GAACGACATC ATCTCGGCGA CCGTCCAGAC GGAGATCAGT
CAGATCGACC CGTCGGTGTC GTATGGCGGA TTTCCAGGCT TCCTGACGCG CAGCGCCAGT
TCGGACATCT CTCTGCGGGC AGGCGAAACG ATCGCAATTT CGGGCCTCGT CAGCGCGGAC
GCGTTGAATG GATCGGCAGG GATGCCGTTT TTTGCGCGGC TGCCCATCAT CGGGCAACTG
TTCCGCTCTG ACAGCTTCCG CGCGAAGAAC AGCGATCTCG TGATTTTCGT GACGCCGCTG
ATCTCGGAGC CGTCTGGCGA ACCGAATACC GCGCTGCTGG CACGTGCGCA GGAAGGCGGG
CGACGTTACG CGCAACAGTA CGGCGCGCGC AGTCCGCTCG ATGTGCCCAT TGCGCAGCCT
GCGCCCTCGA ATGCAACGCA CAACCCCTCA CATTGA
 
Protein sequence
MEAGIYPNAL RCFASAALFM GVLAAGASAA DATSAQRGVD ADAAQNAAVL DLYKGEVRML 
NVPGTIKRIA IGNGKLLTAN VVDGRVMLLA ESAGITSLVV WNERGVALQT TVRVAKGDVG
MSAAQLRSVL AAVPGVRVQE VGPNIVLAGS VHREKAAAVK AAIADMTNVI DTTTIDEGDA
LKKTLHFKVQ IMEVTRTGQK DIGIAWDSQF AGPQVSGQGF IGSGAASGAN FFLAGIASTI
TSRINFAINN GDAFILAAPE LNTKSGGTAS FLAGGEVPIP KAGALGTTDV EYKPYGIRLN
IRPVVDANDI ISATVQTEIS QIDPSVSYGG FPGFLTRSAS SDISLRAGET IAISGLVSAD
ALNGSAGMPF FARLPIIGQL FRSDSFRAKN SDLVIFVTPL ISEPSGEPNT ALLARAQEGG
RRYAQQYGAR SPLDVPIAQP APSNATHNPS H