| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4320 |
|---|
| Symbol | |
|---|
| ID | 6245843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1338149 |
|---|
| End bp | 1339714 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642596075 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001860482 |
|---|
| Protein GI | 186473140 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.268323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACCACG TCATCCTGTC GGACTGGCTC GCCGCTCGGC TCGACCGGGC GGCGGCCGAA
CCCGTCTACC GGCAAGTGCT CGAACTGGTG CAGCAGGCCA TTCTGACCGG CCAGCTGCTG
CCGGGTGCGA AACTGCCCAG CTCGCGCGTG CTGGCGTCGG ACCTCGGCAT CGCACGCAAT
ACGGTGCTGC ACGTGTACGA CCAGCTCACG GCGGAAGGCT ATGTCATTTC GACGACGGGC
AGCGGCACCT ATGTCGCGGA CACGCGCCCG GACACGGCCG CCGTCAACGT GCGCAAGGGA
CCACCGGCGG CGAATGGCTC CATTGGCGCG GTCGGTATGC GCGCGAGTGC GGGCAGCGCG
CCGTCCGCTG CGCCCGCGCA AAGCGGCCTG TCGACGCGCG GCGCGCGGCT CATTCGCCAG
GCGGGCGTAT CGGCCAAACA GTGGGGCGCA TTCATGCCGG GCGTGCCGGA TGTCGCCGAG
TTTCCGGCGC GCACATGGAG CCGCCTGCAA GCCAAGTTGT GGAAGGAAGC GAATCCCGAT
CTGCTCACCT ATGCGCCGGG CGGCGGTTAT CGTCCGTTGC GGCGCGCGCT GTCGGACTAT
CTGCGCGTCG CGCGCTCGGT AAAGTGCACG CCGGACCAGA TCATCATCAC GACGGGCATT
CATCAGTCGA TCGATCTCGC CGTGCGTCTG CTGACGGACG TCGGCGATCG CGCGTGGGTC
GAGGAGCCGT GCTATTGGGG CGCGCGCAGC GTGCTGCAAT CGTCGGGACT GACGCTCGTG
CCCGTGCCCG TCGATGACGA AGGGCTCAAT CCGCGTGAAT CCGATTTGCA GTCGCCGCCG
CGCATCGCGC TCGTGACGCC GTCGCATCAG TACCCGCTCG GGATGGTGAT GAGCCTCGCG
CGCCGCCGCA CGCTGCTCGA ATACGCGCGT CAGCACGGCA CGTGGATCAT CGAGGACGAC
TACGACAGCG AGTTCCGCTA CGGCAGCCGG CCGCTCGCGT CGCTGCAAGG GCTCGACGAC
GCAGGCCAGG TAATCTACGT CGGCAGTCTG GGGAAAATGT TGTTTCCGGG CTTGCGGATC
GGCTACATGA TCGCGCCGGA ACATCTGGTC GATACGTTTC GCACCGGCGT CGCCGAGTTG
TATCGCGAGG GACAGCTGAT GCAGCAAGCC GTGCTGACGG AATTCATCAT GGACGGCTAT
TTGACCTCGC ACGTGCGGCG CATGCGGGCG CTGTATGGCG AGCGCCGCCA GATCCTCATC
GACGCGATCA CCGAGCGTTT CGGCGACGCG CTGCCTGTAA TGGGCGACGA AGCGGGCCTG
CATCTGGTGC TCGGGCTGCC CGACCACGCG GACGATCGCG AGGTGACGGC GGCATCCTAC
GATGCCGGCG TGATCGTGCG TCCGCTCGCG GCGTATTACA ACAGCGAAAC GCCGGAGCGC
CGCGGCCTGC TGCTCGGCTA TGCATGCGTA CCGAATGAAC GCATCGGGCC GTCGTTCGAC
ACGCTCGCCC GCGTGATCGA ACGGACTGCA CTGAAGCGAG CGGCTGTGCC CACGCAGGCG
GCGTGA
|
|---|
| Protein sequence | MDHVILSDWL AARLDRAAAE PVYRQVLELV QQAILTGQLL PGAKLPSSRV LASDLGIARN
TVLHVYDQLT AEGYVISTTG SGTYVADTRP DTAAVNVRKG PPAANGSIGA VGMRASAGSA
PSAAPAQSGL STRGARLIRQ AGVSAKQWGA FMPGVPDVAE FPARTWSRLQ AKLWKEANPD
LLTYAPGGGY RPLRRALSDY LRVARSVKCT PDQIIITTGI HQSIDLAVRL LTDVGDRAWV
EEPCYWGARS VLQSSGLTLV PVPVDDEGLN PRESDLQSPP RIALVTPSHQ YPLGMVMSLA
RRRTLLEYAR QHGTWIIEDD YDSEFRYGSR PLASLQGLDD AGQVIYVGSL GKMLFPGLRI
GYMIAPEHLV DTFRTGVAEL YREGQLMQQA VLTEFIMDGY LTSHVRRMRA LYGERRQILI
DAITERFGDA LPVMGDEAGL HLVLGLPDHA DDREVTAASY DAGVIVRPLA AYYNSETPER
RGLLLGYACV PNERIGPSFD TLARVIERTA LKRAAVPTQA A
|
|---|
| |