| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4317 |
|---|
| Symbol | |
|---|
| ID | 6245840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1331770 |
|---|
| End bp | 1333182 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642596072 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001860479 |
|---|
| Protein GI | 186473137 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.872596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA ATCGCCGAGA TCAGTTTCCG TTTCAGTTGG CCTGCGCGAC GCTTGCAGGC
GTCGCATTCT TCTCCGGCTG CTCGTCGACG CCCATGGTGG CACCCAAGCC TACGGGCTGG
ATCAAGGACG AAGTCGCCGA TTCCTATGTC TTTGCCTATC CGCTCGTGCT CATGGGCGCG
GCGCGCGACG CCGCCGTCGG CACAGGTCCA GGCCAGGCGC CCGTCAACAC GCTGCGTCAC
GCGTCGGCGC TGCCGCCCGT CGGCGCGCAC AATCCGCCGA CGCCCGGCAT CGACACGCTG
GATTCGACCG CCTGGCTCGA CGTCGACGAC GAACCGGTGA TCGTCTCGCT GCCTTCGTCG
GCGGGCCGCT ATATGGATGC GCGCGCGCTC GACATGTGGA CCAACGTGCT GTGGTCGACG
AGTACGCGGG GCGCGGCGCG CGTGTCGGGC GTGAAGGCGC AGACGGTCGC GTTCGCGAAG
CCCGGCTGGA AAGGCGATCT GCCTAAGGAC GTCAAACGTA TCGACGCGCC CACGCGCAAC
ATCTGGCTCG ATGTGCGGAT CCAGTCGAAC GGCGGGCGCG ACCTGACGGC CGTGCGCAAG
GTGCAGCGCG GCGTCCGCGT GATGCCGCTG TCCGTCTATG TGGGTGAGGA GCAGGCGGCG
TCCGTTGCGC CGCGTAGCAT GCCCGCCGAC GCAAACCCCG GCACACCCGC CGAGCAGGTC
GCGGCACTCG ACGCGAAAGG CTTCTTCGAC CGCGTCGCAC AGTTGCTGCC TGACAATCCG
CCATCGCCCG AGGACCCGCA TGCGCTCAAG TTTCTCTCGG ACCTCGGCGT CAAACCGGAC
GAGCCGGTTG AGTTGCCCGC CAAAGCCGCC GACGCGATCG CCAGCGGTTT GGCGGACGGC
CGTACACGCA TCGCGACGCC GCCTGGCAAC ATGTTGACGG CGAACGGCTG GAGCTTTTTC
GGCGAGGGCG CCGGCAACTA CGGACCCGAC TATGCATTGC GCGCGTACGC GGCGTACGCG
CAGCCGGGCA TCGGCACGAA GGACGACGAA CTGCGCGGCA GTGTGTCGCT CGACAGCGAC
GGCCATGCGT TGAACGGCGC AAACCGTTAC GTGATGCACT TCGCGCCGAA CCAGGTGCCG
CCCGTGCGCG GCTTCTGGTC GGTGACGGCG TACACGAAGG ACGGTGCGCT CGGCGACAGC
ACCCCGTCGC GCGCGTCAGT CGGCGACAAG TCGGGCGTGC GGCGCAATCG CGACGGCTCG
GTCGACGTGA CCGTGTCGGC GGCGAAACCG CGCAAGGCGT CCAACTGGCT GCCCGCGCCG
CGCGGCGATT TCCAGATGGT GCTGCGCCTC TACGCACCCA AGCCCGAAGC CAGCGACGGC
AGTTGGCAGC CGCCTGCCGT CGTGCGGCAA TAA
|
|---|
| Protein sequence | MIKNRRDQFP FQLACATLAG VAFFSGCSST PMVAPKPTGW IKDEVADSYV FAYPLVLMGA
ARDAAVGTGP GQAPVNTLRH ASALPPVGAH NPPTPGIDTL DSTAWLDVDD EPVIVSLPSS
AGRYMDARAL DMWTNVLWST STRGAARVSG VKAQTVAFAK PGWKGDLPKD VKRIDAPTRN
IWLDVRIQSN GGRDLTAVRK VQRGVRVMPL SVYVGEEQAA SVAPRSMPAD ANPGTPAEQV
AALDAKGFFD RVAQLLPDNP PSPEDPHALK FLSDLGVKPD EPVELPAKAA DAIASGLADG
RTRIATPPGN MLTANGWSFF GEGAGNYGPD YALRAYAAYA QPGIGTKDDE LRGSVSLDSD
GHALNGANRY VMHFAPNQVP PVRGFWSVTA YTKDGALGDS TPSRASVGDK SGVRRNRDGS
VDVTVSAAKP RKASNWLPAP RGDFQMVLRL YAPKPEASDG SWQPPAVVRQ
|
|---|
| |