| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4294 |
|---|
| Symbol | |
|---|
| ID | 6245818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1306212 |
|---|
| End bp | 1307060 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642596050 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
|---|
| Protein accession | YP_001860457 |
|---|
| Protein GI | 186473115 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.145034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TTCGTTATGG ACCGAAGGGC CAGGAAAAGC CGGGCTTGCT GGATGCGCAG
GGCAAGATTC GCGATCTGTC GAATGTGGTC GCCGACATCG ACGGCAGCGC GTTGACTGAC
GCAGCGCTCG CTAAGCTGCG CGCGATCGAT CCGGCGTCGC TGCCGGTGGT TGAAGGCAAT
CCACGCATCG GACCGTGTGT CGGCAAGATT GGCAAGTTTG TGTGTATTGG CCTGAACTAT
GCTGACCATG CGGCCGAATC GAATCTGCCC GTACCGACCG AGCCTGTCGT TTTCAACAAG
TGGACGAGCG CGATCGTCGG TCCTAACGAT GGCATCGAGA TTCCGCGCGG CTCGAAGAAG
ACGGACTGGG AAGTCGAGCT GGGCGTCGTG ATCGGCAAGG AGGCGAAGTA TGTCGACGAA
GCGAATGCGC TTGATTACGT TGCGGGCTAT TGCGTGATCA ACGATGTATC CGAGCGCGAA
TGGCAGATCG AGCGCGCGGG TCAATGGGAC AAGGGCAAGG GTTTTGACAC GTTCGGCCCG
ATCGGGCCGT GGGTTGTCAC CCGGGACGAA GTGCCCGATC CGCAAAATTT GAAGCTGTGG
CTGGAGGTGG ACGGGCATCG TTATCAGAAT GGCAGCACGA AGACGATGGT ATTTGGCGTG
GCCAAGCTGG TTTCTTATCT CTCTCAATGT ATGAGCCTCC AGCCTGGTGA TGTGATTTCT
ACTGGCACGC CGCCTGGTGT AGGAATGGGC GTCAAGCCCG AGCCGGTGTA TTTGAAGGCT
GGGCAGACTG TGAAACTCGG AATTGAAGGG CTTGGCGAGC AAGCCCAGAA GACTTATTCG
GCCGAATAG
|
|---|
| Protein sequence | MKLLRYGPKG QEKPGLLDAQ GKIRDLSNVV ADIDGSALTD AALAKLRAID PASLPVVEGN
PRIGPCVGKI GKFVCIGLNY ADHAAESNLP VPTEPVVFNK WTSAIVGPND GIEIPRGSKK
TDWEVELGVV IGKEAKYVDE ANALDYVAGY CVINDVSERE WQIERAGQWD KGKGFDTFGP
IGPWVVTRDE VPDPQNLKLW LEVDGHRYQN GSTKTMVFGV AKLVSYLSQC MSLQPGDVIS
TGTPPGVGMG VKPEPVYLKA GQTVKLGIEG LGEQAQKTYS AE
|
|---|
| |