| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4248 |
|---|
| Symbol | |
|---|
| ID | 6245775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1240301 |
|---|
| End bp | 1241227 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642596007 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001860414 |
|---|
| Protein GI | 186473072 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCTGA AGAATCTGCT CCGCCGCCTC GACCTCACGA CCCTGCAACT CTTCATCGCT
GTCTATGAGG AAGGCACGCT GACGCGCGCC GCGGAACGCG AGGCCATCGC GGTATCTGCC
GCGAGCAAGC GGCTGCTCGA ACTGGAGCAG GCCGTCGGCG CGACGCTCTT TCAGCGCAAC
GCACGAGGCA TGACGCTCAC GCCGGCGGGC GAAACGCTGC TGCATCATGC ACGGCGCGTG
ATGCGCGGCA TCGAGAACAT CGGCATCGAG CTTGCGGGCC ACGCGAGCGG CGTGCGCGGC
TATGTGCGGA TGATGGCGAA CCTCTCCGCG ATCGTCGAAT TCCTGCCCGA AGATCTGCGC
GCGTTTCTCG CTGTCAACGA CCGTGTGAAG ATCGACCTCG AAGAGCGGCC GAGCGGCGGC
GTGGTCGAAG CCGTGGCCGA CAGTCTCGCC GACCTCGGCA TCTGCTCTGG CGAAGCGGAC
GCGCGCGGTC TCGAAGTGAC GCACTACCGG CACGACGCGC TGTGCGTCGT GATGCGCGAC
GATCATCCGC TTGCGGCGCG CGAAAGCGTT GCGTTCGAAG AAACGCTAGA CAGCGATCAC
GTCGGCTTGC ATTCAGCCAG TTCGATCAAC GCGCGCACGC ACATGGCCGC GCGCCAGGCT
GGCAAGGCGC TCAAGCTGCG CATCCACGTG CCGGGCTTCG ACGCCGTGTG CCGGATGGTG
CAGGCGGGCA TGGGCGTCGG TGTGCTGCCC ATCAACGTGT ACCGCATCAT GGGGCGGCCG
CTCGGCCTCG CTGCCGTTGC GCTCGAAGAC GAATGGTCCG AGCGCGACCT CATCATCGTG
ACGCGCGACT CGGCGCGTCT TTCGCCCGTC GCAAGGCTGC TGTTCGATCA TTTGCGCACG
GTCGAAGCCT TGTCCGGCAA GGACTAA
|
|---|
| Protein sequence | MVLKNLLRRL DLTTLQLFIA VYEEGTLTRA AEREAIAVSA ASKRLLELEQ AVGATLFQRN
ARGMTLTPAG ETLLHHARRV MRGIENIGIE LAGHASGVRG YVRMMANLSA IVEFLPEDLR
AFLAVNDRVK IDLEERPSGG VVEAVADSLA DLGICSGEAD ARGLEVTHYR HDALCVVMRD
DHPLAARESV AFEETLDSDH VGLHSASSIN ARTHMAARQA GKALKLRIHV PGFDAVCRMV
QAGMGVGVLP INVYRIMGRP LGLAAVALED EWSERDLIIV TRDSARLSPV ARLLFDHLRT
VEALSGKD
|
|---|
| |