| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4217 |
|---|
| Symbol | |
|---|
| ID | 6245745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1208000 |
|---|
| End bp | 1209004 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595977 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001860384 |
|---|
| Protein GI | 186473042 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.40732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.891617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA AGCTTCGACG CCTTACTTTG TCCGCAATGG CCGCAGCACT GCTGGCTACG
CCGTTCGCCA TGCAGATGAC CGCGCACGCG GACACGCCGC TGAAAATCGG CGTGCTCGTG
AAGATGCCCG AACAGGCATG GTTCATCAAC GAGCAGAAGG CGGCGACCGC TCTCGGCCAG
AAGGAAGGCT TCTCGGTGGT CAACATCGGC GCGCCTGACG GCGAAAAGGT GCTGGCCGCG
ATCGACAATC TCGGCGCACA AGGCGCGCAA GGCTTCGTGA TCTGCCCGCC CGATGTACGT
CTCGGACCGG CCATTCAGGC GCGTGCCAAG CGCTACAACA TGAAGTTCGT CACCGTCGAC
GACCAGCTCG TCGACTCCAC GGGCAAGCCG CTCGCAGGCG TGCCGCATCT CGGCATGTCG
GCGTTCAAGA TCGGCAATCA GGTGGGCCAG GCGATCTCCG ACGAAATGAA GAAGCGCGGC
TGGAAGCCGG AAGAAGTGGG CGCAATCCGC ATCACCGACT ATGAGCTGCC GACGGCCAAG
CTGCGCACCG ACGGCGCAAC GGAAACGCTG CTCGCGAACG GCTTCAAGAA GGACAACATT
TTCGACGCGC CGCAAAAGAC CACCGACGAC GAAGGCGGCT TCAACGCGGC ATCGCCCGTG
CTGTCCAAGC ATCCGAACAT CAAGAAGTGG GTAATCTTCG CGCTGAACGA AGAGACCGTG
CTGGGCGGCG TGCGCGCCAC GGAGCAGTTG CATATTCCGG GCGCGGACGT GATCGGCGTC
GGCATCAACG GCGCGGGCGA AGCGTTCGCC GAGTTCCAGA AGAAGGAACC GACGGGCTTC
TACGGCACGA TCGCAGTCAG CTCGACGAAC CACGGCAAGC AGAGCACGCA GAATCTCGTC
GACTGGATCA AGAACGGCAA GCAGCCGCCC GCCGATACGC AGACCACGGG CAAGCTGATG
ACGCGCGAAA ACTGGAAGGA CGTGCGTACG GAACTTGGAA TCTGA
|
|---|
| Protein sequence | MTRKLRRLTL SAMAAALLAT PFAMQMTAHA DTPLKIGVLV KMPEQAWFIN EQKAATALGQ
KEGFSVVNIG APDGEKVLAA IDNLGAQGAQ GFVICPPDVR LGPAIQARAK RYNMKFVTVD
DQLVDSTGKP LAGVPHLGMS AFKIGNQVGQ AISDEMKKRG WKPEEVGAIR ITDYELPTAK
LRTDGATETL LANGFKKDNI FDAPQKTTDD EGGFNAASPV LSKHPNIKKW VIFALNEETV
LGGVRATEQL HIPGADVIGV GINGAGEAFA EFQKKEPTGF YGTIAVSSTN HGKQSTQNLV
DWIKNGKQPP ADTQTTGKLM TRENWKDVRT ELGI
|
|---|
| |